| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0125 |
|---|
| Symbol | sdhB |
|---|
| ID | 7085223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 151535 |
|---|
| End bp | 152230 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643697171 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_002353820 |
|---|
| Protein GI | 217968586 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGA ACATCTATCG CTACGACCCG GAGCGCGGCG ATCCGCCGCG GATGCAGGCC
TACGATGTGC AGCCGGAGGC GGGCGACAAG AAGCTGCTCG ACCTGCTGAT GAGGCTGCGC
GTGCAGGACG ACAGCCTGTC GTTCCGGCGC TCGTGCCGCG AGGGAGTGTG CGGCTCGGAC
GCGATGAACA TCAACGGCCG CAACGGCCTC GCCTGCCTGA CCGCGCTCGA CGGGCTGAAG
GAGCCGATCG TGCTGCGCCC GCTACCCGGC TTTCCGGTAA TCCGCGACCT CGTCGTAGAC
ATGACGCAGT TCTTCGCCCA CTACCACTCG ATCCGGCCCT GGCTGATCAA CGACGAGCCC
CTGCCCGAGC GCGAGCGGCT GCAGACCCCG CCCGAGCGCG AGCGCCTGGA CGGCCTGTAC
GAATGCATCC TGTGCGCCTG CTGCAGCGCG TTCTGCCCGT CCTACTGGTG GAATCCGGAC
AAGTTCATCG GGCCGTCGGG CCTGCTGCAG GCCTATCGCT TCATCGCCGA CAGCCGCGAC
ACCGCCTCCG CCGAGCGGCT GGACTTCCTC GACGACGTCT ATCGCCTCTA CCGCTGCCGC
ACGATCATGA ACTGCACCGA GGTCTGCCCG AAGGGACTGA GCCCCTCGCA CGCCATCGAA
CGGATCCGCC TGGCCTTGCT GCAGCGTTCA TCCTGA
|
|---|
| Protein sequence | MRLNIYRYDP ERGDPPRMQA YDVQPEAGDK KLLDLLMRLR VQDDSLSFRR SCREGVCGSD
AMNINGRNGL ACLTALDGLK EPIVLRPLPG FPVIRDLVVD MTQFFAHYHS IRPWLINDEP
LPERERLQTP PERERLDGLY ECILCACCSA FCPSYWWNPD KFIGPSGLLQ AYRFIADSRD
TASAERLDFL DDVYRLYRCR TIMNCTEVCP KGLSPSHAIE RIRLALLQRS S
|
|---|
| |