Gene Tmz1t_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0095 
Symboldef 
ID7083478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp108092 
End bp108595 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID643697142 
Productpeptide deformylase 
Protein accessionYP_002353791 
Protein GI217968557 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTCC TACCCATTCT CCGCTACCCC GATCCCCGCC TCCACACGGT CGCCGCGCCG 
GTCGGCCGGG TCGACGACGA AATCCGCAGG CTGATCGCAG ACATGGCCGA GACCATGTAC
GAAGCGCCCG GCATCGGGCT GGCCGCCACC CAGGTCGATG TGCACAAGCG CATCGTCGTC
ATCGACGTGT CCGAGGACAA GTCCGGCCTG ATGGCGCTGA TCAACCCCGA GATCCTGGAG
CGTTCGGGCG AACAGGTGTG CGAGGAAGGT TGCCTGTCCG TACCCGGAAT CTACGAGAAG
GTGTCGCGCG CCGAGCGTGT GAAAGTTCGC GCCTTGAACG AAAAGGGTGA ATCCTTCGAG
TTCGAGGCCG ACGGCCTGCT CGCGGTATGC GTGCAGCACG AGATCGACCA CCTCGACGGC
AAGGTCTTCG TCGAATACCT GTCGCAGCTC AAGCTCGGCC GCATCAAGTC CAAGCTGGCC
AAGAAGGCCC GCATCACCGC GTGA
 
Protein sequence
MALLPILRYP DPRLHTVAAP VGRVDDEIRR LIADMAETMY EAPGIGLAAT QVDVHKRIVV 
IDVSEDKSGL MALINPEILE RSGEQVCEEG CLSVPGIYEK VSRAERVKVR ALNEKGESFE
FEADGLLAVC VQHEIDHLDG KVFVEYLSQL KLGRIKSKLA KKARITA