| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0066 |
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| Symbol | |
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| ID | 7083449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 75538 |
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| End bp | 76191 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643697113 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002353762 |
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| Protein GI | 217968528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.22289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCCCG AAATCCATCC CTCGATCCCC GCCCTCCACG TCGACGAGTG CCTCCTCGTC
GTCGACAAGC CTGCCGGCCT GCTCTCCGTC CCCGCGGGCG GGGAAGGCCG GCAGGATTGT
CTGGCGGCGC GGATCCAGGC GCGCTGGGCC GACGCCCGCA TCGTGCATCG GCTCGACGCC
GCCACCTCCG GCCTGGTGCT GTTCGCGCGC GGCGCGGAGA TGCTGCGGCG CATGAGCCTC
GCCTTCGAGC AGCGCATCGT CGGCAAGCAG TACGTGGCCG TGGTGCACGG CCATCTCGCC
CAGGACGACG GCGAGATCGA CCTGCCGCTG GCCGAGGATG CGGACAACCG GCCCCGCCAG
ATCGTCGATG CGCTGCGCGG CCGGCGCGCG CTCACGCGCT ATCGCGTGCT CGATCGCCAA
GGGGCGGGCG CCGACGCCTG CAGCCGCCTG GAGCTCAAGC CGGTCACCGG GCGCGCGCAC
CAGCTGCGCG TGCATCTGCT CTGCCTCGGC CACCCCATCT TCGGCGATCC GCTCTATGCT
CCGCCCGAGT CCGCCGCCCG CTTCGGCCGC ATGCACCTGC ACGCCGCCCG CATCGCCTTC
ATGCATCCAC ACACGCGCGT GCCGATGGTG TTCGACAGCC CGGCGCCGTT CTGA
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| Protein sequence | MRPEIHPSIP ALHVDECLLV VDKPAGLLSV PAGGEGRQDC LAARIQARWA DARIVHRLDA
ATSGLVLFAR GAEMLRRMSL AFEQRIVGKQ YVAVVHGHLA QDDGEIDLPL AEDADNRPRQ
IVDALRGRRA LTRYRVLDRQ GAGADACSRL ELKPVTGRAH QLRVHLLCLG HPIFGDPLYA
PPESAARFGR MHLHAARIAF MHPHTRVPMV FDSPAPF
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