Gene Tmz1t_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0038 
Symbol 
ID7083421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp45394 
End bp46305 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID643697087 
Producthypothetical protein 
Protein accessionYP_002353736 
Protein GI217968502 
COG category[K] Transcription 
COG ID[COG4271] Predicted nucleotide-binding protein containing TIR -like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTCA CGCGCCGTAT CTACGTCAGC CTCCCCGCCG ACCCATGGCT GCCGCCGAAC 
CTCAATGCCC TCAAGTGGGG CATCGTCGAC GAGATCGCCA AGCTCGGCTT CACGCCCGAG
ATCTTCACGA ACCCAAGGGG CCAGTCCGGG CTTGCTTCAG CCAAGGCCTG GAATCCGCGC
GATGCCGACG AGATCGCGCG CCGCTGCGTG GGGGCAGCCG TGCTCGGGAT GCCGCGCTGG
CGTTTTCGTG ACGGTGACGG CCAGGACGTG CTGCTGCCGA CCGAGTTCAA CCATTACGAG
GGCGCGCTTA CCCGAACCCT GGGCCTGCCC ACCCTGGTGC TGGTGCAACG GGACGTGCTG
CGGCGGGTGG TCTTCGACGG CAGTTTCGGC GGTTACGTCG GCCAGTTTCC AGCCGACGCA
GGGGTCGGTT GGCTGCACAC CGACGAATTT TTGGTCCCCT TCAAATACTG GACCGACCAG
CTCCGCGAAC GCCGCGACAT CTTCCTGGGC TACTGCAGCA GCTCAGCGTC GACGGCGGCG
CAGATCAAAC GCTACCTGGC GAGCCAAAAC GCGAGCGTGC TGGATTGGCA GAGCGACTTC
ATCCCGGGCC GCACGATCAT CGACCAGATC GAGGAGGCAG CTTCCCGCTC GATTGCCGGC
ATCTTCCTGT TCACCAAGGA TGACGATCTC GCCAACCCGA GCGAGGCCCA CCAGTCGGTG
CCGCGCGACA ACGTCGTGTT CGAGGCCGGC TACTTCAGCG GACTCAAGGG CAAGCGCAAC
GTGCTCATCG TTCGCGAGGC CGGCTCGAAG ATGCCGGCCG ACCTCGGAGG CGACATTTAC
GCGGCGCTGA TGGACCGTAA CGACATCGCA CCGATCGAGA GAACGCTAGC CGCGTTCATC
GGTGCAATAT GA
 
Protein sequence
MSVTRRIYVS LPADPWLPPN LNALKWGIVD EIAKLGFTPE IFTNPRGQSG LASAKAWNPR 
DADEIARRCV GAAVLGMPRW RFRDGDGQDV LLPTEFNHYE GALTRTLGLP TLVLVQRDVL
RRVVFDGSFG GYVGQFPADA GVGWLHTDEF LVPFKYWTDQ LRERRDIFLG YCSSSASTAA
QIKRYLASQN ASVLDWQSDF IPGRTIIDQI EEAASRSIAG IFLFTKDDDL ANPSEAHQSV
PRDNVVFEAG YFSGLKGKRN VLIVREAGSK MPADLGGDIY AALMDRNDIA PIERTLAAFI
GAI