| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1925 |
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| Symbol | |
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| ID | 5297656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1910913 |
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| End bp | 1911596 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640770191 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_001307142 |
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| Protein GI | 150021788 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0113351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTGG CAGTGATCTT ATTTGGAGGG AAAGGAGAAA GATTTTCAAA AGATTATCCA
AAACAGTTTG TGAAATTTCA CGGTAAAACG TTAATGGAGC ATACTGTTGA GAAATTTTTA
GAAAATTTTA TTCATTTAAT TATTATTGTT GTTAATGGAG AGTATCTTGA AGAATCTAAA
AAAATCTTGA AAAAGTACAA GCGTAAAAAT ATTTATGTTA TTTTAGGAGG AAAAACCAGA
GAATTTTCAA CTTTAAATGC TGTTAAATAC TTAAAAGATT TAATTTCAGA GGATGATAAC
GTTATAATCC ACGATGGAGC GCGCCCTTTT GTTAGTAAAG AGGTGATTTT AAGAAATATT
GATTTTGTAA ACAAATATGG TGCTGTAGTA ACAGCAGTAC CAGTTGAGAA TACTATAGCT
TTTGTTGAAA ATAAAATTGT AAAAGAAATC CCACCTAGAA GATACTTATT TACCTTACAG
ACTCCTCAGA CCTTTAAATA TTCAATCCTT TATAAATCTT TTCGTTTAAT AAAAGATCTT
GAGAAGTTTA CAGATGACTC ATCGGTTGTT TTGGCTGCTG GTTACAATGT GCATGTGGTT
TATGGTGAAA AAACTAATAT AAAAATTACA ACTAAGGAAG ATTTGTATTT AATTGGAGTT
GAGAAAATTG AAGGGAATAT ATAG
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| Protein sequence | MNVAVILFGG KGERFSKDYP KQFVKFHGKT LMEHTVEKFL ENFIHLIIIV VNGEYLEESK
KILKKYKRKN IYVILGGKTR EFSTLNAVKY LKDLISEDDN VIIHDGARPF VSKEVILRNI
DFVNKYGAVV TAVPVENTIA FVENKIVKEI PPRRYLFTLQ TPQTFKYSIL YKSFRLIKDL
EKFTDDSSVV LAAGYNVHVV YGEKTNIKIT TKEDLYLIGV EKIEGNI
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