| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1860 |
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| Symbol | |
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| ID | 5297983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1845359 |
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| End bp | 1847038 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640770128 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001307079 |
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| Protein GI | 150021725 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000937746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA GAGAAAAATT AAAAGATATA GAAGATAAAA TGAGAGACTA TGATGGAAAT
GTAAAAAAAG CAATTGAAAG ATTTCCTGAA AGAAAAGAAG AATTTAAATC TACATCTGGA
TATGAATTTA AAAGATTATA TACACCACTT GATGTAGAAA GATTTGATTA TTTAAATGAT
TTAGGATTTC CTGGTATGTA TCCATTTACT AGAGGTGTTC AACCTACAAT GTACAGGGCT
AGGTTTTGGA CAATGAGGCA ATATGCTGGA TTTGGAACAG CCGAAGAATC TAATAAGAGG
TATAAATATT TGTTGGAACA AGGGCAAATG GGATTATCGG TTGCATTTGA CTTGCCAACA
CAAATAGGTT ATGATTCGGA TGATCCAATG GCAGAGGGAG AAGTAGGAAA AGTTGGTGTT
GCAATTGATT CATTAGAAGA TATGGAAATA TTATTTGATG GTATACCTTT GGATAAAGTA
AGTACATCTA TGACAATTAA TAGTACGGCG GCTATTCTTT TGGCTATGTA TATTGCAGTT
GCGGAGAAAC AAGGAGTTCC AATGGAAAAA CTTTCTGGAA CTATTCAGAA TGATATATTA
AAGGAATACA TTGCAAGAGG AACATATATT TTTCCACCAC AACCTTCAAT GAGGATAATA
ACCGATATAT TTGAATTTTG TTCAAAAAAT ATGCCCAAAT GGAACCCAAT TAGTATTAGT
GGATATCATA TTAGGGAAGC GGGTTCAACG GCTGTTCAAG AAGTGGCCTT TACACTTGCC
GATGCAATTG CATATGTTGA AACTGCTATT AAAGCAGGTT TGGATCCAAA TGTTTTTGGA
AGAAGGCTTT CTTTCTTTTT TGCTGCACAT AATAATTTCC TTGAAGAAAT TGCAAAATTT
AGGGCAGCAA GGAGATTATG GGCAAAGATT ATGAAGGAAA GGTTTGGAGT AACGAATGAA
AAAGCAATGA TGTTACGTTT CCATACACAG ACTGGAGGTT CTACACTTAC GGCCCAACAA
CCATTGAATA ACATAATACG TGTTACTATT CAAGCATTGG CAGCTGTTCT AGGTGGAACT
CAATCATTAC ATACGAATAG TTATGATGAA GCACTTGGTT TGCCAACAGA AGAATCAGTT
AGAATAGCTT TAAGAACTCA ACAGATAATA GCATATGAAT CTGGAGTGGC GGATACAATT
GATCCATTAG GCGGTTCCTA TGTAATAGAA GCATTAACAA ACAATATAGA AGAGAAAGCT
ATGGAATATA TTAAGAAAAT CGATGAAATG GGAGGAATGG TAAAAGCAAT AGAAAGTGGG
TATGTGCAAA AGGAGATTCA CGAAAGTGCG TACAAGATGC AGCTGGCTGT TGAAAAAGGA
GAAGAAGTAA TTGTTGGGGT TAATAAATTT AATATTGAGG AAGATTTGAC GCAAAAAGAA
GTGTTGAAGG TTAATCCTGA ACTAGAAGAA AAGCAAAAGA TGAAATTGAA AAAGTTAAAG
AAAAAACGGG ATAATAGTAA AGTGGAGAAA GTTTTAAAGA ATATAAAGAA TACAGCTTCA
TCTGGTGAAA ATTTAATGCC ATATATTTTA GAAGCTGTTA AAGCTTATGC AACAGTTGGA
GAAATTAGTA ATGCTTTGAG GGAAGTTTTT GGTGAATATA CAGAAACAAT AGTAATTTAA
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| Protein sequence | MFDREKLKDI EDKMRDYDGN VKKAIERFPE RKEEFKSTSG YEFKRLYTPL DVERFDYLND
LGFPGMYPFT RGVQPTMYRA RFWTMRQYAG FGTAEESNKR YKYLLEQGQM GLSVAFDLPT
QIGYDSDDPM AEGEVGKVGV AIDSLEDMEI LFDGIPLDKV STSMTINSTA AILLAMYIAV
AEKQGVPMEK LSGTIQNDIL KEYIARGTYI FPPQPSMRII TDIFEFCSKN MPKWNPISIS
GYHIREAGST AVQEVAFTLA DAIAYVETAI KAGLDPNVFG RRLSFFFAAH NNFLEEIAKF
RAARRLWAKI MKERFGVTNE KAMMLRFHTQ TGGSTLTAQQ PLNNIIRVTI QALAAVLGGT
QSLHTNSYDE ALGLPTEESV RIALRTQQII AYESGVADTI DPLGGSYVIE ALTNNIEEKA
MEYIKKIDEM GGMVKAIESG YVQKEIHESA YKMQLAVEKG EEVIVGVNKF NIEEDLTQKE
VLKVNPELEE KQKMKLKKLK KKRDNSKVEK VLKNIKNTAS SGENLMPYIL EAVKAYATVG
EISNALREVF GEYTETIVI
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