Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1859 |
Symbol | |
ID | 5297917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1844466 |
End bp | 1845344 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640770127 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_001307078 |
Protein GI | 150021724 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000208333 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AAGGAACATG GATGGTTAAA GAGGGTTTTG CTGAAATGTT TAAAGGTGGA GTTATAATGG ATGTTACTAC TGCAGAGCAG GCAAAGATTG CAGAGGAAGC AGGAGCGGTG GCTGTAATGG CTTTAGAAAG AGTTCCTGCT GACATTAGAA AAGCAGGTGG AGTAGCTAGA ATGGCAAATA TTTCAAAAAT TAAGGAAATT ATTGAAGCAG TGTCAATCCC AGTTATGGCA AAAGTAAGGA TTGGTCACAT TGCTGAAGCA AGAATTTTGG AAGCTTTAGG GGTTGATTTT ATAGACGAAT CAGAAGTTCT CACTCCTGCG GATGATAAAT ATCATATAAA TAAATGGGAT TTTAATGTTC CATTTGTATG TGGTGCAAGA AATTTAGGAG AAGCTTTAAG AAGAATTGCT GAAGGTGCTG CAATGATTAG GACAAAGGGA GAAGCGGGAA CTGGTAATGT TGTGGAAGCA GTAAAGCATA TGAGAACGGT TATGGATGAA ATAAGAATGG TTCAAAATAT GCCTGATGAG GAACTGGTAA CATTTGCTAA AAACATAGGT GCACCAGTAA ATTTAGTTGC AAAGGTAAAA GAATTAGGAA GGCTTCCAGT TGTTAATTTT GCAGCAGGTG GTGTTGCAAC TCCAGCAGAT GCTGCACTTA TGATGATGTT AGGAGCTGAT GGAGTATTTG TTGGTAGTGG TATTTTTAAA TCCAAAGATC CCGCTAAAAT GGCAAAAGCA ATAGTAATGG CAGTTACTTA TTGGAATGAT CCAGAAATGT TATTAAAAAT TTCAGAGGAT ATTGGTCAAC CAATGGAGGG ATTGGAAATA GAGGAGCTTG ATGTGAAACT CCAAGAAAGG GGTTGGTAA
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Protein sequence | MSEKGTWMVK EGFAEMFKGG VIMDVTTAEQ AKIAEEAGAV AVMALERVPA DIRKAGGVAR MANISKIKEI IEAVSIPVMA KVRIGHIAEA RILEALGVDF IDESEVLTPA DDKYHINKWD FNVPFVCGAR NLGEALRRIA EGAAMIRTKG EAGTGNVVEA VKHMRTVMDE IRMVQNMPDE ELVTFAKNIG APVNLVAKVK ELGRLPVVNF AAGGVATPAD AALMMMLGAD GVFVGSGIFK SKDPAKMAKA IVMAVTYWND PEMLLKISED IGQPMEGLEI EELDVKLQER GW
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