Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1858 |
Symbol | |
ID | 5297916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1843901 |
End bp | 1844464 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640770126 |
Product | glutamine amidotransferase subunit PdxT |
Protein accession | YP_001307077 |
Protein GI | 150021723 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0468928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAATTG GTGTTTCTGG TATCCAAGGA GATTTTAGAG AGCACAAAGT AATGCTTGAA AGACTTGGAG TTGAAGTATT AGTTGTTAGA AAACCTGAAG AATTAGATGA AGTTGAGGGA TTAGTTATTC CTGGTGGAGA ATCAACAACG ATGATTAGAA TAATGAAAAT GGTTAATTTA TATGAAAAGC TAAAAGAAAA GATATTATCT GGTTTTCCCG TGTTTGGAAC TTGTGCTGGT ATGATTTTAT TGTCGAAAGA GGTTGTTAAC TTTAAACAAG ATTCGCTAGG GGTTATAGAT ATTAAGGTTG AGAGAAATGC ATATGGTAGA CAGGTTGACA GTTTCGAGAC GGATGTTGAA ATCAAGGGAT TTGATAAATC ATATAGAGCA ATTTTTATTA GAGCACCAAA AGTTGTAGAT TATGGGAATG ATGTTGAAGT GTTATCAATA TATGAAGATG CGCCAATTTT ACTAAGACAA AAAAAAGTAT TAGTAGCTTC TTTTCATCCC GAATTAACTG AAGATACCAG AGTACATGAA TATTTCTTAA GTATGGTGAA ATAA
|
Protein sequence | MKIGVSGIQG DFREHKVMLE RLGVEVLVVR KPEELDEVEG LVIPGGESTT MIRIMKMVNL YEKLKEKILS GFPVFGTCAG MILLSKEVVN FKQDSLGVID IKVERNAYGR QVDSFETDVE IKGFDKSYRA IFIRAPKVVD YGNDVEVLSI YEDAPILLRQ KKVLVASFHP ELTEDTRVHE YFLSMVK
|
| |