Gene Tmel_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1842 
Symbol 
ID5296636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1827190 
End bp1827717 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content34% 
IMG OID640770110 
Productadenine phosphoribosyltransferase 
Protein accessionYP_001307062 
Protein GI150021708 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.530485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTGC CTACATTGGA ATTAAAAAAA TTTATAAGAG ATATCCCAGA TTTTCCAGAA 
AAAGGGATTA TATTTAGAGA CATAACACCA CTGTTAAAAA ACCCTGAAGC TTTTAATTTT
GCAATTGATC AATTAGTAAA CAAACTCAAA GAAATAGAAT TCAATACTAT CGTTGCACCA
GAAGCAAGAG GCTTTATCTT TGGTGGAGCT CTAGCGTACA AATTGGGAAA AGGACTTGTC
CCGGTTAGAA AACCCGGTAA ATTACCTTAC AAAGTAATAT CTGAAAAATA CTCTTTGGAA
TATGGTGAGG CAGAACTTCA AATGCATATA GATGCAATTT CCCAAGGTGA AAAAGTAATA
ATTTTTGATG ATGTACTTGC AACTGGGGGA ACTGCACTTG CTTTAAAAAA ACTTGTCGAG
AAAGCTGGTG GAGAGGTTGT CTCTATGGCA TTCTTAATAG AATTGACTTA TCTTAATCCT
CGAAAGCTTC TTTCAAAAGA AAACATTATT TCTCTTATTA CATATTAA
 
Protein sequence
MEVPTLELKK FIRDIPDFPE KGIIFRDITP LLKNPEAFNF AIDQLVNKLK EIEFNTIVAP 
EARGFIFGGA LAYKLGKGLV PVRKPGKLPY KVISEKYSLE YGEAELQMHI DAISQGEKVI
IFDDVLATGG TALALKKLVE KAGGEVVSMA FLIELTYLNP RKLLSKENII SLITY