| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1808 |
|---|
| Symbol | |
|---|
| ID | 5296749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1791619 |
|---|
| End bp | 1793151 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640770076 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001307028 |
|---|
| Protein GI | 150021674 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.31572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAA GAAGTAATTG GTGGATAATA TCATTCCTAT TTGTAATTGG GGGACTTTTC
GTCCCCTTAT TTTTCTTGTT TTACAAATTT GGTGGTGCCA ATTTTAATGT CATACGCGAA
CATTCAAATA TAGTGAGGTT TACTATCTTT CAGGCATTTT TATCATCCTT TTTTACTCTT
CTACTTGGAC TTCCTGGAGC ATATATTATT GCTAGAACAA AAACCAACAA ATTTTTTAAT
TCTATATTTA GAATACTTTC TTCAATACCA TTTATACTCC CTGGTGTTAC AATGAGTATA
GGTTTTCTCA TGGCATTTGG AAAAAACGGA CTAATAACGC GCCTTTTAAA TCTGTTTGGT
TTTAGAGAAA GGATATTGTA TACTTTTACA GCAATTATAT TAGGTCATGT ATTTTATAAT
TTTCCTCTCT ACATTAGAAT TGTTGGAGAA ACTTGGGAAA AAATTGATTC AAGTTTAATT
GAAGCTGCTA AAATGGATGG TGCAAAAAAT TTGAAAATAT TTTTCACTAT TGAACTTCCA
TTACTAACAT CTTCAATAAT AAAAGCTTTT CTTTTAACAT ATGTATACAC ATTTACCAGT
TTTTCAGTTG CCCTAATACT TGGCGGAATA AAATATTCTA CAATAGAAGT TGCCATATAT
ATGTACACAA AAATACTTTT TGATTTTAAA AGTGCATTTG CACTCTCTAT ATTCCAAATA
TTTTTCATTT CAATTGTTTC TTATATTTTA ACCTTTGAGA AAGAAGTATT TCAAACCGGG
AAATCATTAA AAGATAAATT TCCCATATGG GGTTATTTCT ATCTCTTTAT TGCTATAATT
TTTGTTTTCA TTCCACTATT TTATTCATTA ATTTCAGGAT TTATAGAATA CGGTGGGAAA
TTAGGCTTTG AAAATTTCAA AAGATTAATT ACACTTGATT TGAGAAGATA TGTAGGTACA
AATCTTTCTT CAATGATAAT ATATACAGCC TTCTTTGCCA TAACTTCATC TGTAATTTCC
GTTCTAATTT CTATAGCCAG TTCTTCAAAA AACAAACTTC AATATATAAT GTTTCTACCT
GCTGCAATTT CCCCAGTTAC ACTGGCTTTT TCTTACATAT CCCTAAATAT AAATCAATTT
ATTTCCATTC CCATTATACA TTCATTCATA ACCCTTCCTA TAGTATACGG AATTATTTCA
AGCGGTTGGA AAGCCATAAA CAAATATTCT ATTGAGGCTG CATTACTTGA TGGTGCAAAC
ACCTTTGAAT TAGTATTTAA AATAAAAATC CCACAAGTAA AATATCACAT ATTAACTGCC
TTTTTTTATG CATTAACACT TTCAATTGGA GAAATGTCCG CAACAATAAC AATAAGCCAA
CCTCCGATTT CAACACTTTC AATATCAATA TATAGACTTT TAAGTTCAAG AAGGATACCA
GAAGCAAGAG CTCTAAATAC ATTATATTCC CTAATTGTTA TTCTATTGTT CTCATTAGTA
GAATATCTTA GAAATAGAAA AGTAAATAAC TAA
|
|---|
| Protein sequence | MVKRSNWWII SFLFVIGGLF VPLFFLFYKF GGANFNVIRE HSNIVRFTIF QAFLSSFFTL
LLGLPGAYII ARTKTNKFFN SIFRILSSIP FILPGVTMSI GFLMAFGKNG LITRLLNLFG
FRERILYTFT AIILGHVFYN FPLYIRIVGE TWEKIDSSLI EAAKMDGAKN LKIFFTIELP
LLTSSIIKAF LLTYVYTFTS FSVALILGGI KYSTIEVAIY MYTKILFDFK SAFALSIFQI
FFISIVSYIL TFEKEVFQTG KSLKDKFPIW GYFYLFIAII FVFIPLFYSL ISGFIEYGGK
LGFENFKRLI TLDLRRYVGT NLSSMIIYTA FFAITSSVIS VLISIASSSK NKLQYIMFLP
AAISPVTLAF SYISLNINQF ISIPIIHSFI TLPIVYGIIS SGWKAINKYS IEAALLDGAN
TFELVFKIKI PQVKYHILTA FFYALTLSIG EMSATITISQ PPISTLSISI YRLLSSRRIP
EARALNTLYS LIVILLFSLV EYLRNRKVNN
|
|---|
| |