Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1674 |
Symbol | |
ID | 5298255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1662198 |
End bp | 1663259 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 640769950 |
Product | CRISPR-associated RAMP Csm5 family protein |
Protein accession | YP_001306902 |
Protein GI | 150021548 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.901558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATATG AAGTTGAAGT TTTAACCCCC TTAGCAATAA ATAATGGAAA TGAAATTAAA AGCTTTGAAA TTATACGTGA GGGTGGAAAA TCGTATATTT TAGATTTCAA CAAACTTTTT GAAAATGAAA ATTTTGTTGA ATTAGTTGTT AATTCTCCAC AAATTCTATC AGATGAAGAT TCATTAAAAA AAGCTTTTAA ATTTTTGAAA CTTGATTATA AGAAGTATAC TAAGATGGTT TTAAACTATC CTTTAGACAA AAGGTATAAC ATTAAGGAAT TTATTAAAAC AATTGGGAAA CCCTTTTTAC CAGGTTCATC CTTAAAAGGT GCCATAAGAA CAGCATTGAT TAGAGGTAAT AATTTTGAAG AACATTACAA AAAAAGCCTT AATTTTCTCA ATAAAAGTAA AGGTAGAAAT ATAAATAAAA AACATTTCGA TGATTTTGTT GAAAAAAAAT TATTTGGTGA TTCATATGAA TCTCCTTTTA GGTTTTTAAG GATTTCTGAT GGTTATGTGG TTTCAAATCA TGATTTAAAA ATTGTTCCCA TTGAAGTTTT AAATTTAAAG AAAAAAAGGC GAGTGCTTCC ATATATTTAT ACAGAAGCAT TAAATCTCCA CACAAAGATA AGAGGAAATA TAGATTTTGG ATTTTTAGAA GCAATAAAAA ATAGTGAATT TAAAGATAAT TTCAAAAACT TGCAAATTGT CGAAGATTTT GTCAAAAAGG TGAATAATGG TGTGAAAAGG TACATAAATG ATGAAATTGA TTTGTTGAAA GGTAATTTAA AAGAATTAGA GACTTTTTAT TCAACTTTAT TAAAAAGAAT GAACAATTTG AAAGATAATC AATTCATTGT ACAAATAGGT TTTTCAACGG GTTATTATTC TAAAACAGTT GTTGGAAAAC TTGATTCAAA TCAAATAAAG TTAATGAAAA TAAAAAGGTT ATTATACAAA AAAGTTAAAC CTGAATTTTT CCCAGTAACT AGAAGAGTAG TAAGACGAAA TGGAGTGATG GAACCATTAG GATGGATTTT GGTGACGTTA AAAGAGGAGT GA
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Protein sequence | MIYEVEVLTP LAINNGNEIK SFEIIREGGK SYILDFNKLF ENENFVELVV NSPQILSDED SLKKAFKFLK LDYKKYTKMV LNYPLDKRYN IKEFIKTIGK PFLPGSSLKG AIRTALIRGN NFEEHYKKSL NFLNKSKGRN INKKHFDDFV EKKLFGDSYE SPFRFLRISD GYVVSNHDLK IVPIEVLNLK KKRRVLPYIY TEALNLHTKI RGNIDFGFLE AIKNSEFKDN FKNLQIVEDF VKKVNNGVKR YINDEIDLLK GNLKELETFY STLLKRMNNL KDNQFIVQIG FSTGYYSKTV VGKLDSNQIK LMKIKRLLYK KVKPEFFPVT RRVVRRNGVM EPLGWILVTL KEE
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