Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1662 |
Symbol | |
ID | 5298004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1649247 |
End bp | 1650062 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 640769939 |
Product | CRISPR-associated RAMP Cmr6 family protein |
Protein accession | YP_001306891 |
Protein GI | 150021537 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.894194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATT ATAAATATGA TATAGAGAAA CTTAAAGATA AGAATTCATT TATTAAAAAC GCAAGTTTAT ATTACAATAA ATTCGTATTT AAGGAATTGG TAGTGTTAAA TAACAAAATT ACATCTAAAT CATTTAAAAA ATCTTTGAAG GAAATAAGAG AAAGATATAA AGACGTTTTA ATTTCTATTA TTAAAAACTT ATTTGAATCT TCAAAATCGG GAAGTGATTC TTTACAAGAA ATAATTAACT CCTTACGAAA AATAAGGGAA AATTTTATCA ATTCTTTAAA ACAAAGATAT ATTATATTGA GTTATACCTT AGAAGTTAAA ACTCCATTTT TAATAGGTGC AGGAATACCT TCCATCGATG AAATAGGCTT TTATTGGTTG AGAAATTATG GAATACCAGT TATTCCTGGA ACAAGCATAA AAGGATGTTT CAAGAGTTGT CTATTAGATG TTTTGAAGGA TTACTTAGAA GAGATATTCG GAACAGAAGA CAAAATGGGA AAAGTAATTT TTCTTGATGC AATACCTTTA GGTGAAATTT GTTTAGGAAT TGATTTTCAA ACACCACATT TTCAAAAATA TTACATTGAT AACAAACCAC CAAATGATGT TTATAATCCT GTGCCACTGA GTTTCTTGCA TGTAAGTAAG GGAAGATTTA GATTGGATAT ACTAATTGAT AAAGATGAAG GTAATATTGC TGATAAAATT AAAAATCACA TAAAGATTTT TTTAGAAGAA TATGGAGTCG GTGCTAAAAC ATCTATGGGC TATGGAAGAT TTAAAATTAT AAATCAAAAT AGTTAA
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Protein sequence | MNYYKYDIEK LKDKNSFIKN ASLYYNKFVF KELVVLNNKI TSKSFKKSLK EIRERYKDVL ISIIKNLFES SKSGSDSLQE IINSLRKIRE NFINSLKQRY IILSYTLEVK TPFLIGAGIP SIDEIGFYWL RNYGIPVIPG TSIKGCFKSC LLDVLKDYLE EIFGTEDKMG KVIFLDAIPL GEICLGIDFQ TPHFQKYYID NKPPNDVYNP VPLSFLHVSK GRFRLDILID KDEGNIADKI KNHIKIFLEE YGVGAKTSMG YGRFKIINQN S
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