Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1632 |
Symbol | |
ID | 5298229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1620346 |
End bp | 1621017 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640769909 |
Product | single-stranded nucleic acid binding R3H domain-containing protein |
Protein accession | YP_001306861 |
Protein GI | 150021507 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.694857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAAAGC TGACACTTAC AGGAAAAAAT GTGGAAGAAA TTTTAACAAT ATTTGAGGAA GATATGAATA TAAAAAAAGG AGAATATGAT TATTTGGTTA TTGATAAAGG TTCAAGTGGT TTTTTAGGTT TTTTGTCTCG TGATGCGGTA GTTGAAGTTA CGATAAAGAA AGAATACTAC GAAAGAAAAT TGAAAGAGTT TTTGGAAAAT GTGGTAAGAT GTTTTGATGA AGGAATAAGT GTAGAGGTGT TTTCAAAGAA TAATAGGGTT TTTATTGCAA AGATAAAAGG AGAGGGTATC GGGAAAATAA TTGGAAAACA CGGAAAAGGT TTAGGTGCAT TGCAGCATAT TGCTACAATT TTTCTAAATA GATTGTCTGA TATAAAAATT ACTGTGATTA TAGACGCGGG AGACTATAGG GAAAAAAGAA AGGAATTGAT AAAAAATATT GTTGTAAATG CCGTTGAAAA GTTGAGAAAT GGTGCAAAAA AGATAGAGTT GGATCCCATG TTTTCTTTTG AAAGAAGGTT AGTACATGAA TTTTTAAAAA GATATCCAGA TGTTTTTTCA TATTCCGAAG GAGTTGAGCC GTATAGATAT GTGGTAATTG AAAGGAGGGG AAAGAATGAT AGTTTCCAAA CCAGAAAGAG TAGAACCTAT AATAATAGAT GA
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Protein sequence | MRKLTLTGKN VEEILTIFEE DMNIKKGEYD YLVIDKGSSG FLGFLSRDAV VEVTIKKEYY ERKLKEFLEN VVRCFDEGIS VEVFSKNNRV FIAKIKGEGI GKIIGKHGKG LGALQHIATI FLNRLSDIKI TVIIDAGDYR EKRKELIKNI VVNAVEKLRN GAKKIELDPM FSFERRLVHE FLKRYPDVFS YSEGVEPYRY VVIERRGKND SFQTRKSRTY NNR
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