Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1544 |
Symbol | |
ID | 5297393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1535597 |
End bp | 1536904 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640769821 |
Product | RNA methyltransferase |
Protein accession | YP_001306774 |
Protein GI | 150021420 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.144945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA TTGTTTATAT TGAGAAAATG GCATATGGTG GTAATTCGAT AGGGAAATTA CCGGGTGGAA AAATAGTCTT TGTCGAAGGA GCATATCCTG GTGAACTTGT TGAAATCACA ATTTTGAAGG ATAAGAATGA TTATGCGATA GCAAAAGTTG ATAAAATTTT AGAAACTATT CCTGAAAGAA GTACGCCAAA ATGTCCATAT TTCAAAGAAT GTGGAGGATG TGATTTTTTA GATTTAAAAT ACGATAAACA GTTAGAGATA AAAAAACAGG TTTTTTTGGA ACAACTTTTA AGAATTTCGG GATTAAATAT TAAAAATGTG GAAATTGAAA GGAGTAATTT TGAATATAAC TATAGGTTGA AAATGGAATT TTCCGTGACT AGGAATAAAA AATTAGGGTT TAAAAGAAAA AAAAGTAATA GGGTTGTAGA AATAAAAAAG TGTTTAATTG CACCTAAGCC TATGAATCAA GTTTTGGATG TTCTTCCAGA AATTTTAGAT GCTTTTAACG TTTCAGTGTA TAATGGAAGA AATGGAGTTT TGAAAAATAT AGTATTAAGA TATTCTCCTA GGGGAGAGTT GATGGTGGTT TTTGTTACCA AGATGGAAAA TTTTAAAGAT GCAAAAAAAA TTGCAAATGT TTTAAGCAAA CAAGTGTCAT TAATAACTTC GGTGGTTCAT GTTATGAATA GTAATGATAA AGTAGTATTG AGAGGACCAT ATAGGATTTT AAAAGGTGAA GGTGTTATAT CATATGAGTT TAGTTGGGAA AAATTTCAAG TACCTCCAAC TGCATTTTTC CAAAACAACT TTTATGTAAC GGAAAAAATG ATAGACTATT TGACTAAGAA TCTAGATTTG AATGGTAATG AAGTAGTTTT GGATTTGTTC AGTGGTCTTG GGACATTTTC CATTAGACTT GCGTTATTGT CCAAATTTGT AGTTGCTGTG GGATCAAATC ACGTTTCAGT AAAAGCAGGA CGTGCAAATG CAAACATTAA CGGATTAAGG AATATTAAAT TTATAGAATC TGATGCTTAT GAGTTTTTAA AAAATTCAGA GAAAAATTTT GATGTGTTAG TAGTTGATCC ACCTAGGTCT GGTTTGGGAA AGGAAATGTG TAATGAAATT TTGTTACGCA AACCGGAGAA GATAGCTTAT GTGTCTTGTA ATCCGTCGAC TTTTTCAAGG GATTTAAAAA TGTTGATGGA ATTGTATGAG ATAAAGAGTA TAAAGTTATT TGATATGTTT CCTCAAACTT ATCACATTGA ATCAATAGCA ATATTAGCTA GAAAATAA
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Protein sequence | MKEIVYIEKM AYGGNSIGKL PGGKIVFVEG AYPGELVEIT ILKDKNDYAI AKVDKILETI PERSTPKCPY FKECGGCDFL DLKYDKQLEI KKQVFLEQLL RISGLNIKNV EIERSNFEYN YRLKMEFSVT RNKKLGFKRK KSNRVVEIKK CLIAPKPMNQ VLDVLPEILD AFNVSVYNGR NGVLKNIVLR YSPRGELMVV FVTKMENFKD AKKIANVLSK QVSLITSVVH VMNSNDKVVL RGPYRILKGE GVISYEFSWE KFQVPPTAFF QNNFYVTEKM IDYLTKNLDL NGNEVVLDLF SGLGTFSIRL ALLSKFVVAV GSNHVSVKAG RANANINGLR NIKFIESDAY EFLKNSEKNF DVLVVDPPRS GLGKEMCNEI LLRKPEKIAY VSCNPSTFSR DLKMLMELYE IKSIKLFDMF PQTYHIESIA ILARK
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