Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1514 |
Symbol | |
ID | 5296869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1501168 |
End bp | 1502418 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640769791 |
Product | NusB/RsmB/TIM44 |
Protein accession | YP_001306744 |
Protein GI | 150021390 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.164457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAGTG ATTTAATAAT TGCCTATAGA CTGCTAAGAA AAAAATTCAG ATCGGGAATT TTCTCAACGG AATTTTACCA AGCTTTCTCC TATGTGGAGG AGAAAGCTTT TTTTAAAAAC CTAATTTTTG GAGTTTTAAG AAAGCAAGAA TACCTCGACT GGGTAATAAA TTCTCTTTTG AAGAAAAAAG ATATTCCTCC ATCTATTAGA ACAATACTTA GAATAGGTAC ATACCAACTC TTATTTACAA ACAAGCCTAG TTATTCAATT GTTAATGAAA CAGTTGAATT GGTTGAAAAA AAATCATTTA AAGGACTAGT TAATGCCATT TTAAGAAAGA TATCAAAAAT TGGATATACT GAACCTAAAG AATTATATTT AAAATATTCA CATCCAAAAT GGTTAATAGA ATATTGGAAA AAATTTCTCC CCTTAGATTA CATATACAAA ATACTTGAAT ATAATCAATA TCCTTTAAAA ACAACTGCAA GAGTTAACAA AAGAAAAATT GATAGAGATA AGCTAAAAAT TGAAAATATT TTTCCAACTC CTCATTCGCC CGTGGGAATA TATTTTGAAA AAATTGAAGA AAATCCATGG AAACTAGATA AATACATAAA TGGATACATC ACATACCAAA GCGAATCATC ACAAATAATT CCTTTATTAG TTGATTTTGA AAAAGATGAA TTAGTTTTTG ATGCATGTGC TGCACCTGGA GGCAAAGCCA CGCACATATT GGAACTTTGT GACGTTAATC TTGTTATTAA CGATGTTGAA AAGCAAAAAA TAAAAATTCT TGAAAACCAA TTCAAACGAT TAAATCTAAG ACCAAAAAAA ATATTAAATT TTGATGCGCA AAAAATAACC TTAAAAGACA AATTTGACAA AATATTCATA GACGCTCCTT GCAGTAGCCT AGGCATTGCA CGAAGAAATC CCGAGGTATT AAGACGGCAA AAAAAGGAAA ACTTTAAAAA ACTTTCAGAA ATACAAATAA ATATCATCTC AAATCTTTGG AAATACCTAA AAAAACATGG GATAATGATA TATTCAACTT GCACAGTAAC TATCGAGGAA AACACAAATA CCGTAAAAAA ATGGAAACCA TTTGCGGAAT TTGTAGATAT TAGGGAGAGA TTGGAAAAAT TTGGAATAAA ATATGTCTGG GATGGTTATG GTACATTATT CTATCCTGAT GAAATATTAA CACCGTTCTA CGTTTCAATA TTAAGAAAAA TAAAGGAGTG A
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Protein sequence | MKSDLIIAYR LLRKKFRSGI FSTEFYQAFS YVEEKAFFKN LIFGVLRKQE YLDWVINSLL KKKDIPPSIR TILRIGTYQL LFTNKPSYSI VNETVELVEK KSFKGLVNAI LRKISKIGYT EPKELYLKYS HPKWLIEYWK KFLPLDYIYK ILEYNQYPLK TTARVNKRKI DRDKLKIENI FPTPHSPVGI YFEKIEENPW KLDKYINGYI TYQSESSQII PLLVDFEKDE LVFDACAAPG GKATHILELC DVNLVINDVE KQKIKILENQ FKRLNLRPKK ILNFDAQKIT LKDKFDKIFI DAPCSSLGIA RRNPEVLRRQ KKENFKKLSE IQINIISNLW KYLKKHGIMI YSTCTVTIEE NTNTVKKWKP FAEFVDIRER LEKFGIKYVW DGYGTLFYPD EILTPFYVSI LRKIKE
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