Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1416 |
Symbol | tgt |
ID | 5297502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1416318 |
End bp | 1417421 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640769692 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001306648 |
Protein GI | 150021294 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000679599 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTGA AATTTGAACT GCTAAAGACT CATAAAAACG CAAGACGGGG AAGGATATAT CTTCCCCATG GTGTGGTCGA AACACCAACT TTTATGCCAG TTGGGACAAA TGCTAATGTA AAGCTAATGA CACCTGAAAA TTTAGAGGAA ATAGGTGCAC AAATTATACT GGCAAATGCG TTTCATTTGT ATTTGAAACC TGGTATGGAG GTTTTAAGGC ATCATAATGG AATACATGAT TTTATGAATT GGGAGAAGCC AATTTTAACT GATAGTGGTG GGTTTCAAGT TTTTAGTTTG AGAAAAGGAA GAAAAATTAC TAAAGAAGGT GTTTTGATAA AGTCTCCATT AGATGGAAGT ATGCGTATGA TTACACCTGA GCTTTCCATG GAGATACAAA ACTCTATTGG TTCAGATATT GTTATGGCGT TTGATTATTG TGCGGAACCT GGAATTTCAC ATCAAGATGC AGTAGTCGCT TTGGAATTAA CCACTTTATG GGCTGAAAGA AGTTTAAAAT CAATTAGGAA TATGTCTGAT CAATCAATAT TTGGAATTGT TCAGGGAGCA TTTTACAAGG ATTTAAGAGA AAGAAGTGCA AAAGAAATTA CTAGTATGGA TTTTGATGGA TTTGCTATTG GAGGTTTGAG TGTTGGCGAA GGGTATGATA TAACCTTGGA AATGACGGAG TTTACTGTTC CCCTTCTGCC TGAAAATAAA CCGAGATACT TTATGGGAGC AGGTGCACCG AGGTTGATAG TAGATTTGGT AAATCTAGGT GTTGATATTT TTGATAGTGT ATTACCTACA AGAGTTGCGA GACATGGTCA AGCATTAACT TGGAAAGGAA AAATGAATGT AAGGGCGGCA AAATATAAAT TTGACAAAAG TCCAATTGAT GATGAATGTA CATGTTATAC TTGTAGAAAC TATTCAAGAT CATATATTAG ACATTTATTT GATAGAGGAG AGGTTTTAGG ACAAATGCTT TTGACTATAC ATAATTTGCA TTTTATGATG GATTTGAGCA AAAAAATAAG AGAGAGTATA GATGGGGGTT ATTTTGAAAA ATTAAGGGGG GAGGTATTAA AATATTATGA TTAA
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Protein sequence | MALKFELLKT HKNARRGRIY LPHGVVETPT FMPVGTNANV KLMTPENLEE IGAQIILANA FHLYLKPGME VLRHHNGIHD FMNWEKPILT DSGGFQVFSL RKGRKITKEG VLIKSPLDGS MRMITPELSM EIQNSIGSDI VMAFDYCAEP GISHQDAVVA LELTTLWAER SLKSIRNMSD QSIFGIVQGA FYKDLRERSA KEITSMDFDG FAIGGLSVGE GYDITLEMTE FTVPLLPENK PRYFMGAGAP RLIVDLVNLG VDIFDSVLPT RVARHGQALT WKGKMNVRAA KYKFDKSPID DECTCYTCRN YSRSYIRHLF DRGEVLGQML LTIHNLHFMM DLSKKIRESI DGGYFEKLRG EVLKYYD
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