Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1414 |
Symbol | |
ID | 5297979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1415419 |
End bp | 1415688 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640769690 |
Product | protein of unknown function DUF861, cupin_3 |
Protein accession | YP_001306646 |
Protein GI | 150021292 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000022631 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTTA AGATAAAAAA GCCTTCTTTA GAAGAATTAG AAGAATTAAA AGTAAAAGAA TGGCCGATTT GGACTAAAGA AAAATCGGAG TTTGATTGGT ATTACGATGA AACAGAAATT TGTTATTTTT TAGAAGGGGA AGTTGAGGTT GAGACAAAAG AAGGAAAAAT ATATAAAATT GGAAAAGGGG ATCTTGTGGA GTTTCCAAAA GGTTTATCTT GTACCTGGAG GGTAAAAAAA CCTGTTAAAA AACATTATAA CTTTATATAA
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Protein sequence | MEVKIKKPSL EELEELKVKE WPIWTKEKSE FDWYYDETEI CYFLEGEVEV ETKEGKIYKI GKGDLVEFPK GLSCTWRVKK PVKKHYNFI
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