Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1387 |
Symbol | |
ID | 5298046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1390518 |
End bp | 1391483 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640769661 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001306619 |
Protein GI | 150021265 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000859188 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCTAAGGT ATATAGCACG GAGATTAATA ATTTTGATTC CTGAACTTCT TATTATTTCG CTGTTAGTGT TTTTAATTAT GCAAGCAGCC CCAGGTGATT TTTTAGATCA GTATAGAATT GACCCAACTG TTTCAAAAGA ATTTATTCAA GCTCTTGAAA AACAGTATGG TCTTGATAAA CCTGTTATGA CACAGTATTT TTTATGGTTG AAGGGAATTT TCAAAGGTGA TTTCGGATAT TCTTTTTACT ATAGAAGACC TGTTATGGAT TTAATTGGCG AAAGAGTTCT TGCTACTTTA ATTTTGTCAC TTTATTCCTT TGTGATTTCT TGGATTGTGG GTATAGTATT GGGAATAGTT TCAGCGTTAA AAAAATATTC CTTTTGGGAT AAATTCTTAA CGGTAATTGC GTTTACGGGA ATCGCAATTC CAGGCTTTTT CTTAGCATTA TTACTACTTT ATATGGCAGC AAAAACTGGA TGGCTCCCAG TTGCAGGTAT GTACGATGTT AACCACAAGA GCATGACGGT ATGGCAAGGG TTTAAAGATA TTTTCTGGCA TATGCAACTT CCCGCATTTA CATTAACGTT TGGTGGATTT GCAGGCTTAA TGAGATATAT GCGTGGAAGC TTATTGGATG TTTTGAATGA GGATTATGTT GAATTTGCAA GGGCAAAAGG TATGCCAGAA AGGGTTGTGA TATTCAAGCA TGCAGTTAGG AATGCAATAA ACCCACTAAT TACAATGTTT GGTTTTAGTT TGTCATCACT CCTTGGTGGA GCTGTTATTA CCGAAACGAT TTTCTCGTGG CCAGGACTTG GAAGACTTGT ATACCAAGCA TTACAACAAC AAGATATGTA TGTTGTAATG GCAAGTACGG TGATAAGTGT TATCATGTTG GTAGTCGGTA ACTTGATAGG TGACATATTG CTAGCAGCAG TTGATCCGAG AATTAGGTTG GAATAG
|
Protein sequence | MLRYIARRLI ILIPELLIIS LLVFLIMQAA PGDFLDQYRI DPTVSKEFIQ ALEKQYGLDK PVMTQYFLWL KGIFKGDFGY SFYYRRPVMD LIGERVLATL ILSLYSFVIS WIVGIVLGIV SALKKYSFWD KFLTVIAFTG IAIPGFFLAL LLLYMAAKTG WLPVAGMYDV NHKSMTVWQG FKDIFWHMQL PAFTLTFGGF AGLMRYMRGS LLDVLNEDYV EFARAKGMPE RVVIFKHAVR NAINPLITMF GFSLSSLLGG AVITETIFSW PGLGRLVYQA LQQQDMYVVM ASTVISVIML VVGNLIGDIL LAAVDPRIRL E
|
| |