Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1386 |
Symbol | |
ID | 5298262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1388719 |
End bp | 1390455 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640769660 |
Product | extracellular solute-binding protein |
Protein accession | YP_001306618 |
Protein GI | 150021264 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.37673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAC TTGCCGTATT TTTGGTTGTA CTTGCAGTGG TATTATCTTT TGCTGCTCAA CTTCCATATA TTGGGGCAGA TGCTAACGGT AAACCAGGTG GTCAGTTTGT GTTGGGAACA TTAAGTGGTC CAAAAACTGT AAATGATGTG GCTGCTAAAG AAACTAGTTC TACCGATGTT ATTGATATGT TTATGGGATA TGGAGGTACA TTGATTGAAA GACATGGTGT AGATATGAAG TTCTATCCTG CTATTGCTGA AAACTGGGAA GGTCCAAGGC TTACAGCAGA TGGTGGTATG GAAATTATTT GGCACATTAG AAAAGGTGTA AAGTTCAGTG ATGGTAACCC TTTAACAGCA GATGATGTAG TATTTACTTT AAATGATATT TATACAAATC CAGATATTCC AAGTTCTATG CAAGATATTT TAAAGAGTAC AAATGGATAT TTACCAAAGG CCGAAAAAAT TGACGATTAC ACAGTAAGGA TGTACTACCC AGAACCATTT AGACTTGCGT TTAGATATTT AGGTGGGATG TATATATTCC CAAAACATAT TGCTGAAGAA TACGTTAAAA ACGGTACATT CCAGGAATTT TGGACAGTTG AAGCTATTAA CGAAGGGAAA ATTGTGGGGC TTGGTCCATA TATTCCTGTA GAGTATGTTC CAGACCAATA CGTAAGGTTT GTAAAAAATC CATACTATTG GAAAAAAGAT GCAAATGGCA ATCAACTACC ATATTTTGAT GAAGTAATTT ATAAAATTAT TTCCAATCAA GATGCAATGA GACTTGCATT TGAAAATGGA GAAATTGATG TATATGTACC AAGAGGAACG GAATTTGCAG AATTAAAAGA AAAAGAGAAG GAATTAAATA TCGTAGTTAC AACAGCAGGA CCAGCTTATG GTACACTATT TATCACATTT AATTGGAATA CACCAGATCC GGTAAAAAGA AAATGGTTTA GAAACGAATA TTTTAGAAAA GCTGTTGCAC ATGCTATAGA CAAACAATCA ATTATCGATA CTCTTTACAA CGGTCTTGCA ATTCCACAAT GGTCACCAGT ATCAATGAGT TCCCCATATT ACAATGAAGA TGTAGTAACA AAATATGAAT TCGATCTTGA CCTTGCAAGA GCAATGCTTG AAATGGGCGG CTTTAGTTGG GACGAAAATG GACAACTTAT CGACGAAGAT GGAAATCCAG TTAAATTCTT ACTTACAACA AATGCAGGGA ACAGAGTGAG AGAGGGTGCT GCAAATATTA TTCAAGATGC TTTGAAGAAA CTTGGAATGG ATGTAACATT TACACCAATC GATTTCAATA CTTTGGTACA AAAATTGTTG AATACAGGTG ATTGGGAGGC AGTAATTATT GGTATAACTG GTAGTGATGA ACCACAAGGT GGAGCAAACA CATGGAAAAT TGACGGAGGA TTACATTTCT GGAACTATTC ACCAGAAGTT GCAGAATATG TTGATGCAAA TGATTACTAC TTGTCAGATT GGGAGCTTGA AATTGATAAG ATATTTAAAG AAAATGTAGC AATATTGGAT GAAGATATTG TAAAAGACTA CTTTGCTAGA TTCCAACAAT TAGTATCCGA ACACTTACCA TTAATTTACA CGGTTAATAC ATTGAGACTA TATGCTTACA AGGCAAACTT GAAAAATGTG AAGATAGGTC CACTTGGTGG AATGACGTGG AACATTTATG AGGAATGGAA GAAATAA
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Protein sequence | MKKLAVFLVV LAVVLSFAAQ LPYIGADANG KPGGQFVLGT LSGPKTVNDV AAKETSSTDV IDMFMGYGGT LIERHGVDMK FYPAIAENWE GPRLTADGGM EIIWHIRKGV KFSDGNPLTA DDVVFTLNDI YTNPDIPSSM QDILKSTNGY LPKAEKIDDY TVRMYYPEPF RLAFRYLGGM YIFPKHIAEE YVKNGTFQEF WTVEAINEGK IVGLGPYIPV EYVPDQYVRF VKNPYYWKKD ANGNQLPYFD EVIYKIISNQ DAMRLAFENG EIDVYVPRGT EFAELKEKEK ELNIVVTTAG PAYGTLFITF NWNTPDPVKR KWFRNEYFRK AVAHAIDKQS IIDTLYNGLA IPQWSPVSMS SPYYNEDVVT KYEFDLDLAR AMLEMGGFSW DENGQLIDED GNPVKFLLTT NAGNRVREGA ANIIQDALKK LGMDVTFTPI DFNTLVQKLL NTGDWEAVII GITGSDEPQG GANTWKIDGG LHFWNYSPEV AEYVDANDYY LSDWELEIDK IFKENVAILD EDIVKDYFAR FQQLVSEHLP LIYTVNTLRL YAYKANLKNV KIGPLGGMTW NIYEEWKK
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