| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1353 |
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| Symbol | |
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| ID | 5297486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1359094 |
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| End bp | 1360455 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769627 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001306586 |
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| Protein GI | 150021232 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAA GAGATTTAAC AAGAGGTAGT ATAATAAAGC AAATATTTTT GATGGGCTTA
CCTACTGCAA TAGGTTTTTC TTTTCAAATG TTTTATGATA TCATAGATAT TTTTTGGATT
GGGAAGATTT CGTCACAAGC AATTGCAGGA GTAGGTATTT TTACCACAAT TTTTTGGGTT
GTTGAAGCTT TAAACGAAAT AATAGGTGTT AGTTCAATTT CGTTGATTTC CCAAAGCTTT
GGAAAAAAAG ATTTTGAAAA AACTAATATG GCTATAGAGC AAACAATAAC TTTTAAGTTC
CTTGTAGCGT TAATTGGAAG TTTGATTTTA ATAGTGTTTT TAAAGCCATT GATGTCATTG
TTTGCTGGTA CACAAATTGT ATTTTATGGA CTAGAATATG GATATTTAAG AATCTTCTTT
TTACCTATTA TGTTTTCTTC TTTTTCAGTT AATACTGCAT TAAGGAGTAT AGGTGATTCT
AAAACACCTA TGTTGTTAAT GATACTTTCA AGCGTTGTGA ATATTATTTT AGATCCAATT
TTGATGTTTG ATAAATTACC TATAGTTAAT ATTCGTGGTT TTAATATGGG AGTTAAAGGA
GCAGCATTAG CTACTATTAT TGCGCAATCT TTGGCATTTT TAATTGGTTT TTATGTACTT
TTTAGTGGGA GAGAAAACAT AAAGCCTTCT TTTAAAAGAT TGTTTAGGTT AATTTTTGAG
TTAGACAAAA AACTTATTTT AATAGGTCTT CCAAATGGCT TTGAAGTTTT CATGAGACAA
TTATCAGCTG TAGTAACTCT TTATTTTGTT GCAATATATG GTGAAGCTAA TATTACAGCT
TATACAATAG GTGGCAGGAT TTTTGGATTT GTTTTTATGC CTTTATGGGG TTTTTTAATG
GGAGGATCTG CTATTATAGG TCAAAATTTA GGTGCAGAAA AAATTTCTAG AGCGGAAAAA
ATTGCAAAGA TTTCAGGTTG GTTTTCAGTA GTATTTACTG CGATATTTTT AATTTTTATT
TTAATATATG CTCCAAGTTT AATTTCAATT TTTTCCAAAG AAGAAAATAT TATAGAAAGT
GGAGCTTTGT TTTTGAGGTA TAGTACTTTG GGATTATTGT TTTTGGCATA CGCAATTGGA
TTAAGTATAG TTTTTCCAGG TTCTGGATAC AATTTACCTT ATCTTTTTAT GAGTCTTGGT
TCTAGGTGGT TTGTTCAGAT TCCTTTAATG TATATTTTTG CAATAGTTTT TAGATTACCA
GTAATTTGGC TTTGGTTATC ATTTGCTTTT GGAGATATAT CGGAATTTAT AATAGCTATC
TATTTTTACA AAAAAGGTGG TTGGAAATAT AAAAGAGTTT AG
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| Protein sequence | MPARDLTRGS IIKQIFLMGL PTAIGFSFQM FYDIIDIFWI GKISSQAIAG VGIFTTIFWV
VEALNEIIGV SSISLISQSF GKKDFEKTNM AIEQTITFKF LVALIGSLIL IVFLKPLMSL
FAGTQIVFYG LEYGYLRIFF LPIMFSSFSV NTALRSIGDS KTPMLLMILS SVVNIILDPI
LMFDKLPIVN IRGFNMGVKG AALATIIAQS LAFLIGFYVL FSGRENIKPS FKRLFRLIFE
LDKKLILIGL PNGFEVFMRQ LSAVVTLYFV AIYGEANITA YTIGGRIFGF VFMPLWGFLM
GGSAIIGQNL GAEKISRAEK IAKISGWFSV VFTAIFLIFI LIYAPSLISI FSKEENIIES
GALFLRYSTL GLLFLAYAIG LSIVFPGSGY NLPYLFMSLG SRWFVQIPLM YIFAIVFRLP
VIWLWLSFAF GDISEFIIAI YFYKKGGWKY KRV
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