Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1308 |
Symbol | |
ID | 5296857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1318030 |
End bp | 1318770 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640769582 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001306542 |
Protein GI | 150021188 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA ACATCAACAA TAAAATATAT GTTATTGAAA ATGATCTTGC AGCAAATAGC ACACTGATAC TAGGCAAAAA AGGAAATATA TTAGTTGATA CTTCATTGTT TCCAAAAAAA GCGGAAAAGA TAAAGGAATT TTCCAAAGAT ATTTCAGGAA AGGACATTAC ATTAGTAATA AACACACATT ATCACCCTGA TCATACATTT GGAAATATAG TATTTGATTG TCCTATAGTT GCAAATAGAT TAACACGAGA ATTTATGAAA AAAATGGATG TGGACTATTT CAAACATTTA AATATGGAAA ACGTAGAAAT AAAGCTGCCA AATGTAATAT TTGAAAACTA CTTTGAATAT GAAGATGGGA TAAAATTGGT AATATACAAT GGACCTGGTC ATACCCTTGA CTCATCATAT ATATATATTG AATCTGAAGA TATATTAATC GCCGGTGATA CAATAGTAAC AGGTATTCAT CCGGAAATAG TCCCTGACAG CAATTTAGAT TTATGGCTCA ACACCCTTGA AAACATGCCA AAATCTTTGA ACATAGTACC CGGTCATGGT GCAATAAGTA ATGAAATAGA AATAGAAAAT ATGATTGATT ATCTTAAAAA GATCAAACAA TTAAAAGAAG GAAGTATAAG CCCAAATAAA ATTGAAAATG ACCCTAACTT TAAAGATAGA AAACACCCAG AATTGTTTAA ATGGAGTTTA GAGAACCTTA TCCCCTCTTA A
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Protein sequence | MIKNINNKIY VIENDLAANS TLILGKKGNI LVDTSLFPKK AEKIKEFSKD ISGKDITLVI NTHYHPDHTF GNIVFDCPIV ANRLTREFMK KMDVDYFKHL NMENVEIKLP NVIFENYFEY EDGIKLVIYN GPGHTLDSSY IYIESEDILI AGDTIVTGIH PEIVPDSNLD LWLNTLENMP KSLNIVPGHG AISNEIEIEN MIDYLKKIKQ LKEGSISPNK IENDPNFKDR KHPELFKWSL ENLIPS
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