Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1240 |
Symbol | |
ID | 5296592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1252326 |
End bp | 1252880 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769516 |
Product | phosphodiesterase |
Protein accession | YP_001306478 |
Protein GI | 150021124 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAATTT TAGTAATTTC TGATACACAC GGTTCATTGA AAAATTGGGA GAAGATTAAA AATATAGTAG ATAGTGTAGA TGAAGTTTTT CATTTAGGAG ATATTTTATA CCATGGTCCT AGAAATCCAT TACCGGATGG TTATGATCCA AAGAATTTGG CAGAGGAATT GAAGAAGACA AATGTAAATT ACGTAAGGGG CAATTGTGAC GCAGATGTAG ATTTGAAAGT TTTAAATATA CAAGAAATGC CAAAGCAGAT AATTGAGTAT TTTGGAAATT TGCCCGTTTA TTTTTTTCAT GGAGAAGTTA TTGAAGATGA TGGATTTGAT TTAATAGCTT TTGCCAAAAA ACATGATGTA AAAATAGTTT TACATGGACA TACACATATT CCAAAAATTG AGGAAATAGA AGGAGTTGTA GTTGCAAATC CGGGAAGTCT TTCACTTCCT AAAAGGGGAT TTCCAAAGAC ATATATGATT ATTGATATAG ATGATAAAGT TACACTTACA ATTTTTGATT TAGAGGGGAA AGAGGTGCTT AAGAAGACCC TATGA
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Protein sequence | MRILVISDTH GSLKNWEKIK NIVDSVDEVF HLGDILYHGP RNPLPDGYDP KNLAEELKKT NVNYVRGNCD ADVDLKVLNI QEMPKQIIEY FGNLPVYFFH GEVIEDDGFD LIAFAKKHDV KIVLHGHTHI PKIEEIEGVV VANPGSLSLP KRGFPKTYMI IDIDDKVTLT IFDLEGKEVL KKTL
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