Gene Tmel_1217 details

Gene Information

• Locus tag: Tmel_1217
• ID: 5297519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1230310
• End bp: 1232154
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640769494
• Product: NADH dehydrogenase subunit M
• Protein accession: YP_001306456
• Protein GI: 150021102
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTCTT TGGTTAATTT GATATTACTT TTTTTGTTTG GATCTTTAAT TTCATATATT 
CTCACAAAAG TCAACAAAGT AATAGGTGCA ATTTTCAATT TTCTTTTAAC AGGATATGCC 
CTTTTTGTTG TGTGGAATGT TGAAGTTGGT ACTACTGAGA AGTTGTTTAG TATTTTTGAA 
GGTTTAGAAA GTGTATTGAA AGTTACCTTT TTGGGGAAAT TTTTTGCTTT AATTAGTTTG 
ATAGTTATTT CATTTGTTGC GTTTTTTGTA CTTGAATGGA TAAAAAAGAA AAATTTGAAT 
GCTGCAGCTT TTAATCTTTT TTATATGTTA ATGATTGCGG GAGTATTAGG TGTATTCTTT 
TCAAATGACT TACTTACACT TTATGTTTTT TGGGAAATTG CCGTTTTAGG TTCGTTTTTG 
ATTGTTCCTA TGGGAAAGGA AGATTCTAAA AAAGCTGCGA TTATATATGT TGTTATTAGC 
GGAATAGGAA GTTATCTATA TCTTTTTGCA ACATTTTCAT TATATTTTAG GTACGGAGTA 
CTTGATTTTA AAGGAGTTTC TCAACATTTA TTGAATGAGC CTTCAAATAT TTATAAATGG 
TTTGTGGTGT TGTTTATTGC TAGTGCAGGT ATTGCAAAAA GTGGTTTGTT CCCGCTTCAT 
ACATGGCTTA GGATAACACA TGGAAATGCT CCTGATGCAT TTAGTGCGGT ACTTTCAGGT 
CAACTTGTAA AAATGGGTTC TTATGTTTTG GCAATTTCTC TTGCTGTGTT TCCAACAACA 
CAGTTATTTA ATGCATTTTA TATGGGAGTA CCTTTGATAA ATTACATTTT AATATGGCTT 
GGTAATATTT CAATAATTAT AGGTACCTTT ATGGCAATTA GACAAAATGA TATGAAACAA 
TTGATAGCTT TTTCTTCAAT TGCAAATGGA GGTTATATAC TTGTTGGTTT AGGTGTTATG 
AATTCTACGG GCTTTGCTGG TGGTTTATTC CATGTATTTA ATCATGCAAT TGCTGCTGCT 
ATGATATTTT TGTCTTTTGC TGCGGTTGTT TATAGGACAG GTACTACAAA AATAGATGAG 
ATGGGTGGGT TAATTTGGAG GATGCCATGG ACCTTTGTGA TTTATCTTGT AGGTATAATT 
TCCCTCGCAG GTATTCCACC AACAAGTGGT TTTATTTCAA AATGGATGAT TTTTAATGCC 
CTTCTTACCA AAGGTATGTT TCTAACTTTG ACAATAACAT TTATTGGGAG TATTGGTTCA 
TTTTTATATG TTTTTAGACC ATTGGCAGGG GTATTTTTGG GGCAGTTAAA AAAGAAACAT 
TATGAGATTG AAGAAGTATC GATTATAATG TTGATACCAA TGTTACTTTT AGTTTTTCTT 
ACGTTGATTA TAGGAATTTA TCCTAAACCA TTATTAGACA TGATTTCATC TGTTGAGCAA 
GAACTTGGAA TAAAGGCCAT AGAATATAGT GGAACAATTA TAAAAACTAG TTTAGGGCAG 
TGGAATACTT TAACAGTATT TAATATGTTT GTTGTTGGTT TCATTATTGC TGTAATTCTT 
TATTTAATTT TCCCAAATGG AAAGAAGGTT AAATTAACAG ATCAGTATAC TGGAGGGGAA 
TATTTGTATA ATTACGATCT TTATCACTAT GCAACGGGAT TTTATAAATT TCTAGAGAGA 
CTTTATGACA AACATCCCTC GTTTGAAAAA TTATATGAAA TGTTAGCTAA CTTTTTTAGA 
AGTATGGGTG GAATTGTTGT AAGCCTCGTA TATAAACCAG GTCCAAGTGG TTATGTATTT 
TGGTTTTCTA TTGTAATCCT CATATTATTT TGGGTGAGGT GGTAA 

 

Protein sequence

MISLVNLILL FLFGSLISYI LTKVNKVIGA IFNFLLTGYA LFVVWNVEVG TTEKLFSIFE 
GLESVLKVTF LGKFFALISL IVISFVAFFV LEWIKKKNLN AAAFNLFYML MIAGVLGVFF 
SNDLLTLYVF WEIAVLGSFL IVPMGKEDSK KAAIIYVVIS GIGSYLYLFA TFSLYFRYGV 
LDFKGVSQHL LNEPSNIYKW FVVLFIASAG IAKSGLFPLH TWLRITHGNA PDAFSAVLSG 
QLVKMGSYVL AISLAVFPTT QLFNAFYMGV PLINYILIWL GNISIIIGTF MAIRQNDMKQ 
LIAFSSIANG GYILVGLGVM NSTGFAGGLF HVFNHAIAAA MIFLSFAAVV YRTGTTKIDE 
MGGLIWRMPW TFVIYLVGII SLAGIPPTSG FISKWMIFNA LLTKGMFLTL TITFIGSIGS 
FLYVFRPLAG VFLGQLKKKH YEIEEVSIIM LIPMLLLVFL TLIIGIYPKP LLDMISSVEQ 
ELGIKAIEYS GTIIKTSLGQ WNTLTVFNMF VVGFIIAVIL YLIFPNGKKV KLTDQYTGGE 
YLYNYDLYHY ATGFYKFLER LYDKHPSFEK LYEMLANFFR SMGGIVVSLV YKPGPSGYVF 
WFSIVILILF WVRW