Gene Tmel_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1214 
Symbol 
ID5297250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1227897 
End bp1228616 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content34% 
IMG OID640769491 
Productputative monovalent cation/H+ antiporter subunit B 
Protein accessionYP_001306453 
Protein GI150021099 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAG TATTCTCATT GTTAATTGTT ACTGGATTGT TGATATTTTT TGTTAGTTCT 
TTATCGGCGA TACCGGAATA TGGAAAGGCA AGGTTATCAA AAGTTTCTAA AGCGTATATA
AATAAAAATG TGAAAGGTGA AACAGGAGAA GTTGAGTTTG AAAAATCTAA AAATTTGGAA
GATGGTGCTG CAAACGTTGT AACTTCAATT GTTGTTGATT ATAGATCATT TGATACCTTA
GGTGAAGTTA CAGTTTTATT TACATCTGCT TTAGGTGTAG GGATAATATT AAATGGAATT
AAAAAGAAAA CTTTTGGAAG AACACCTAAC TTTATCTTAA GGATTTCCGT TGGAATTTTA
TTACCTTTAA TCTTATTGTT TGGTGCTTAC ATCTTTATCC ACGGTCACTT GACACCTGGA
GGGGGTTTTC CGGGAGGTAC TATAATTGCA GCTGGAATAT TGCTCCTTTA CCTTTCCAAT
GAAGAATTTA AACTCGGAAA AGCTTCAAAA TTTGTGGAAA GTGTTGCAGG AAGTGTTTAC
GTAATTATTG GAATTATAGG GTTGGCAATA GGTGGATATT TCTTAATTAA CTTCCTCCCG
ACAGGAGTTT TAGGTGCTTT ATTTAGTGCG GGAATTATTC CAATTGTTTA TGTGGTTATA
GGATTTAAGG TTGGTGCAGA ATTATCAGGT ATAATTGCCG ATTTACACGG GGAGGGATAA
 
Protein sequence
MRRVFSLLIV TGLLIFFVSS LSAIPEYGKA RLSKVSKAYI NKNVKGETGE VEFEKSKNLE 
DGAANVVTSI VVDYRSFDTL GEVTVLFTSA LGVGIILNGI KKKTFGRTPN FILRISVGIL
LPLILLFGAY IFIHGHLTPG GGFPGGTIIA AGILLLYLSN EEFKLGKASK FVESVAGSVY
VIIGIIGLAI GGYFLINFLP TGVLGALFSA GIIPIVYVVI GFKVGAELSG IIADLHGEG