Gene Tmel_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1133 
Symbol 
ID5297411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1157246 
End bp1157614 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content28% 
IMG OID640769411 
Productregulatory protein GntR, HTH 
Protein accessionYP_001306373 
Protein GI150021019 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTTA ACATAAATTT TTCATCCCAT ATTCCCGTTT ACAAGCAAAT TGTGGAAAAT 
ATAAAAATAG AAATATTAAA AGGAAACATA AAAAAAGGCG AGTTTTTACC ATCTATAAGA
AAACTTGCCA GTGATTTAGG TGTGAATCTA AATACAGTGG CAAGGGCATA CAGAGAGCTT
GTAAATGAAA AGATAATTGA AGCTATTAGA GGAGAAGGAT ATATAGTTAT TGAAAACTCG
CTTAAAAATT TTAACAATGA ACTTTTAAAT GATTTATCAG AAATTGTAAA AAAATGCTTA
AAAGCAGGGA TAAGTATTGA CGATATTTGT AATTTGATAA AGGGAGGTGA ATTTAGTGAT
AACAGTTAA
 
Protein sequence
MWFNINFSSH IPVYKQIVEN IKIEILKGNI KKGEFLPSIR KLASDLGVNL NTVARAYREL 
VNEKIIEAIR GEGYIVIENS LKNFNNELLN DLSEIVKKCL KAGISIDDIC NLIKGGEFSD
NS