Gene Tmel_1075 details

Gene Information

• Locus tag: Tmel_1075
• ID: 5296804
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1101849
• End bp: 1102352
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640769358
• Product: glycerol-3-phosphate cytidylyltransferase
• Protein accession: YP_001306320
• Protein GI: 150020966
• COG category: [I] Lipid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0615] Cytidylyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain; [TIGR01518] glycerol-3-phosphate cytidylyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00521191
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAG TCATAACTTA TGGTACATTT GATTTATTTC ATATTGGTCA TTTAAGATTG 
TTACAAAGAG CAAAAAAGTT AGGAGATAAA TTAATTGTTG CTGTTTCTAC AGACGAGTTT 
AATTTAAAAA AAGGAAAAAA GGCTATTATT CCGTATGAGC AAAGGGCCGA AATAGTGAAA 
AATATTAAAA GTGTAGATTT GGTTATTCCT GAAAATAGTT GGGAACAAAA AGTAGAAGAC 
ATAAAAAAAT ATAATGTTGA TATATTTGTA ATGGGAGAAG ATTGGAAGGG TAGATTTGAT 
TATTTGAAAG ATTATTGCGA GGTTATATAT TTACCTCGAA CCCAAGGAAT TTCATCAACT 
GAAATAAGAA ATATTTTGCA ATATATGTCA GAATTATCAA TAACTGATTT AAAAAAAGCT 
TTAGATATTC TAGGTAAAAT AGATTTTGAA GAATTAAGAG AGGCCCTTAA TATTCTTGAA 
CAGCTAAGAA AAGACTTATG TTAG 

 

Protein sequence

MKTVITYGTF DLFHIGHLRL LQRAKKLGDK LIVAVSTDEF NLKKGKKAII PYEQRAEIVK 
NIKSVDLVIP ENSWEQKVED IKKYNVDIFV MGEDWKGRFD YLKDYCEVIY LPRTQGISST 
EIRNILQYMS ELSITDLKKA LDILGKIDFE ELREALNILE QLRKDLC