Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1055 |
Symbol | |
ID | 5297141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1082086 |
End bp | 1083171 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769338 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_001306300 |
Protein GI | 150020946 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.455716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATTA TGCCAAATTT GCGTTTTGGA AATTTAGTTG CCAGGTTACC TATTATTCAA GGTGGAATGA GTGTTGGAAT ATCACTTTCA AATCTTTCAA GTGCTGTTGC AAATGAAGGT GGAATTGGAG TTATTGGTGC AGCTGGAATA GGAATGTTAG AAAAAGATTT TGAAACAAAT TTCAGAAAGG CAAATATTAG AGCTTTGAGA AAGGAGATAA GAAAAGCTAG AAGTAAAACT GATGGGATTA TAGGTGTAAA CATAATGGTT GCGCTTTCAG ATTTTACAGA ACTTTTTGAA ACAGCAATTG AAGAAAAAAT AGATATAATA TTCATGGGAG CAGGTCTTCC TCTTGAAATC CCTATCCAAA AGTTAAAGAA ATCATCCACA AAAATAGTTC CAATAGTTTC ATCGGAAAGA GCTGCAAAGA TAATATTGAA ATACTACATA AAACATTACG GCATACTCCC AGATGGATTT GTTGTTGAAG GACCAAAAGC GGGTGGACAT TTGGGATTTA AAAAAGAACA GATCTTTGAT CAAGAATATG CTCTTGAAAA AATTATTTTA AAAGTTATAT CTGTGGTGAG AGAATATGAA GAAAAATACA AGAAAAAAAT TCCAGTGATA GCGGCAGGAG GAATCTTTTC CGGAAAAGAT ATTTATAAAT TTTTAAAGAT AGGGGCAGAT GGTGTTCAAA TGGCTACTAG ATTTGTGGCA ACTGAAGAGT GCGATGCATC TGAAAAATTC AAAGAAATGT ATTTGAAATG CAAAAAAGAA GATATCGTAA TCATTGACAG TCCTGTAGGA CTCCCGGGAC GCGCAATAAA AAACACTTTT CTCGATAAAG TAAAAGCCGG TATTACAAGA CCCATAAAAT GTCCATGGAA ATGTTTAAAA ACATGCGATT TTAGAAAAGC ACCATATTGC ATTGCAAAAG CTCTAACAAA AGCAAAGTTA GGATTTTTAA AGGAAGGATT TGCATTTGCA GGAGAAAACG CTTTTAAAAT AAAAGAGATT ATATCTGTAA AAAAACTAAT GGAAGAATTA AAAAGAGAAT TTAAAAATGC TGCTTTAGAA ATGTAG
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Protein sequence | MSIMPNLRFG NLVARLPIIQ GGMSVGISLS NLSSAVANEG GIGVIGAAGI GMLEKDFETN FRKANIRALR KEIRKARSKT DGIIGVNIMV ALSDFTELFE TAIEEKIDII FMGAGLPLEI PIQKLKKSST KIVPIVSSER AAKIILKYYI KHYGILPDGF VVEGPKAGGH LGFKKEQIFD QEYALEKIIL KVISVVREYE EKYKKKIPVI AAGGIFSGKD IYKFLKIGAD GVQMATRFVA TEECDASEKF KEMYLKCKKE DIVIIDSPVG LPGRAIKNTF LDKVKAGITR PIKCPWKCLK TCDFRKAPYC IAKALTKAKL GFLKEGFAFA GENAFKIKEI ISVKKLMEEL KREFKNAALE M
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