Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1042 |
Symbol | |
ID | 5296497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1070381 |
End bp | 1071238 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769326 |
Product | hypothetical protein |
Protein accession | YP_001306288 |
Protein GI | 150020934 |
COG category | [R] General function prediction only |
COG ID | [COG3872] Predicted metal-dependent enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.014485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTTG GAGGTCAAGC AATAATCGAA GGTGTTTTAA TGATGGGTAA AAAAATAGTT ATTGCTGTTA GAAATGAGAA AGGGGAAATA GTTAAAGAAG AGTTGGGAAG GATTAAGAAC AAAAGGATTT TGAAAATTCC TTTTGTTAGA GGACTTTTTA GCCTTTTTTA TTCTATGTAT TTTGGATTGA AAGGTTTGGA TAGATCTGCT GAGATTGCTA CGGGAGAAGA AATGAAGAAA TCTGACACAT TTTTTTCCAT TTTTCTTGCA ATTGTTTTGG GAATTGGTCT TTTTATACTA CTTCCTGTGT ATTTAACGGG GCTTTTAGGT GTGAAAAATG ACGAATTTTT ATTTTCACTA GTAGATGGAT TTATTAGACT TGCTTTTTTT CTTATTTATG TGTGGGTAAT TTCGTTTATG AAGGATGTAA AAAGGGTTTT TCAGTACCAC GGTGCAGAAC ATAAGACTAT ACATGCGCAT GAAAATGGGG AAGAACTTAC AGTGGAAAAT ATAAAGAAAT ATTCCACTAT ACATCCCAGA TGCGGCACGA ATTTTATCAT GATTTTTTTG ATAGTTGCAA TAGTATTGTT TAGTCTATTT GGAATATACA ATCCTTTGAC TTGGGGAGAA AGGATTTTAG TTAGAATAAT TTTTATTCCT ATTGTAGCTT CCATTTCATA TGAACTTTTG AAATTGTTCG ATAAAGTAAA ATTTTTGAGA TTTTTGGCAT TACCTGGACT TCTTTTGCAA AAACTTACCA CTGCAGAACC AGATGAAAGA CAAATTGAAG TTGCAATTGA ATCGTTAAAG TTTGCCTTAG AAGGTGATGA AGAAGAGGAA GTGGAATATA TAGGATAA
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Protein sequence | MKVGGQAIIE GVLMMGKKIV IAVRNEKGEI VKEELGRIKN KRILKIPFVR GLFSLFYSMY FGLKGLDRSA EIATGEEMKK SDTFFSIFLA IVLGIGLFIL LPVYLTGLLG VKNDEFLFSL VDGFIRLAFF LIYVWVISFM KDVKRVFQYH GAEHKTIHAH ENGEELTVEN IKKYSTIHPR CGTNFIMIFL IVAIVLFSLF GIYNPLTWGE RILVRIIFIP IVASISYELL KLFDKVKFLR FLALPGLLLQ KLTTAEPDER QIEVAIESLK FALEGDEEEE VEYIG
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