Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0937 |
Symbol | |
ID | 5297769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 971626 |
End bp | 972360 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769219 |
Product | tRNA pseudouridine synthase ACD |
Protein accession | YP_001306183 |
Protein GI | 150020829 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TTGCTATTGA ATTTTCATAC GACGGAACAA ATTTCTTTGG TTATCAAGGA CAACCAAATG TAAGAACTGT TCAAGGTGAG TTAGAAAAAG CACTTGAAAG AATTTTCAAA GAAAGAATCT TTACACAAGG TGCTGGAAGA ACAGATGCTG GAGTTCATGC AAACGGACAA GTTGCAGCAT TTAATTGTCC AATTGACAGA TTAGCTGCAA TTGACATTAA AAATGCATTA AATGCAAACT TACCAGAAGA TATATATGTC AAAAAAGCAT GGGAAGTGGA AAAAAATTTT AATCCACGTT TTAGAGCAAA AAAAAGAATT TACCATTATC TTGTATCTAC AAATGAAAAA GATGTTTTCA AAAGAAATTA CGTCTGGCAT TTCAAATATA AATTAAACAT TGAGGCGATG AGAATAGCTG CGCGTTATTT GGAAGGAGAA CATGACTTTT CTTCTTTTAA AAAAGGGAAT GATAAAAAAA ATCCAATAAG GACGGTTTAT AGGATAAGGA TATTAAATGT TAAAAAAGAA TTAATTTTAA TAAGAGTGGA AGGAAGATCT TTTTTAAGGA GTATGGTAAG AAATATTGTT GGAAGTTTGG TGAGGGTGGG ATTGGGTCAA TGGACACCGG AAAAAATAAA AAAAGTTTTA GAAGCACGTT CGCGGCAAGA GGCGGCTGGT ACGGCACCGC CACATGGTTT ATACTTATAC AAAGTGTTAT TTTAA
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Protein sequence | MKRFAIEFSY DGTNFFGYQG QPNVRTVQGE LEKALERIFK ERIFTQGAGR TDAGVHANGQ VAAFNCPIDR LAAIDIKNAL NANLPEDIYV KKAWEVEKNF NPRFRAKKRI YHYLVSTNEK DVFKRNYVWH FKYKLNIEAM RIAARYLEGE HDFSSFKKGN DKKNPIRTVY RIRILNVKKE LILIRVEGRS FLRSMVRNIV GSLVRVGLGQ WTPEKIKKVL EARSRQEAAG TAPPHGLYLY KVLF
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