| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0884 |
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| Symbol | |
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| ID | 5298321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 919740 |
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| End bp | 920441 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769163 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001306130 |
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| Protein GI | 150020776 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCCTT TATATGATAC TATTCCCAGT AGAAAAAAAC CGTACGTTAC ATATTTTATT
ATCTTTATAA ACGTACTCAT ATTTTTTTAC GAGATATTTC TTTCAAATGA AAAGCTGATA
ATGTTTTTCT ACAATTACGG GGTATTACCT ATTAGATACA CACATGTACT AACTTCAAAC
CCTATATTAC TAAGGAAGTG GGATTATTAC CAACTTTTAC TTAAATCTAA CCCCATTGTT
CCATTCATAT CCCATATGTT TATACATGGC GGTTGGTCAC ATCTTTTGGG AAATATGTGG
TTTTTATGGA TATTTGGAGA CAATGTAGAA GATAGATTAG GTCATTTTAA ATACACTATA
TTTTATATCT CTGGAGGATT ATTCGCCCTT TTCTTTCATA TGCTTTTTAA TTCTTTTTCC
CTATATCCGC TTGTGGGTGC ATCAGGAGCC ATATCAGCTG TTATGGGAGC ATATTTTGTC
CAATTTTGGT ATTCTAAAAT TGTTACATTG ATAATCTGGT TTATACCATT TTTAATTGAA
ATCCCCGCAG TAATATTTTT ATTTGTGTGG TTTTTAATAC AGATAGTAAA CGGAACTTTT
GCAAACATAA CGGGAACTGG CATTGCATAT TGGGCACACA TTGGTGGATT CATATTCGGA
ATATATGCAG GAAGTAAGGT TAAAAGGAGG TACCATTTAT GA
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| Protein sequence | MFPLYDTIPS RKKPYVTYFI IFINVLIFFY EIFLSNEKLI MFFYNYGVLP IRYTHVLTSN
PILLRKWDYY QLLLKSNPIV PFISHMFIHG GWSHLLGNMW FLWIFGDNVE DRLGHFKYTI
FYISGGLFAL FFHMLFNSFS LYPLVGASGA ISAVMGAYFV QFWYSKIVTL IIWFIPFLIE
IPAVIFLFVW FLIQIVNGTF ANITGTGIAY WAHIGGFIFG IYAGSKVKRR YHL
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