Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0795 |
Symbol | |
ID | 5298040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 834802 |
End bp | 836730 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640769073 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_001306042 |
Protein GI | 150020688 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG TTACCGACAT GGTTTTATTA AACAAACCTG GAGAAAAAAT TCTTCTTTTA GGTAACCATG CAATTGCACG AGGAGCTCTT GAAGCGGGGA TCGCCCTTTT TGCAGCATAT CCTGGTACAC CAAGCTCTGA GTTAACAGAT ACAATGGCAT CTGTTGCAAA AGATGTAGGT GTATATATGG AATACTCGAC AAATGAAAAA GTTGCTTTTG AAACGGCTCT TTCCGCTGCG TGGAGTGGTC TTCGCTCAAT GACTGCAATG AAACATGTTG GTTTAAACGT TGCGGCTGAT TCTTTTATGA GTGCCGTAGG TATGGGTGTT GAAGGTGGTT TTATTGTGAT GGTTGCAGAT GATCCAAGTA TGTGGTCATC ACAAAACGAA CAGGATACAA GGGTATTTGG AAAATTTGCC AATGTTCCCG TACTTGAACC ATGCAGTGTC CAAGAAGCAA AAGATCTCAC AAAATATGGG TTTGAAATAA GCGAAAAATT CAAACATATG GTTATTCTTA GAACTACAAC CAGATCTTCC CACATGAGAG GAGACGTAGT ATTAGGGAAA CTTCCTGATG AAATAGTTAA CAAAAAGAGA CGTGTGGGAA AATTCCAAAA AGATCCAAAA AGATTTGTTG ATATACCAGC TCATTCAAAG ACTTTCCATC CAAAAATATT GGAAAATATA GAAAAAATAA GGGAAGAATT CAACAATTGT CCATTCAATA AAATAGAAGG AGAAGGAAAA GTGGGAATAA TCGCATCGGG ATTGGCATAT GCATACGTTA AAGAAGCTAT ATCATGGTTA GGTCTTAAAG ATGTAAAAGT ATTAAAACTT GCCACACCAT ATCCCGTACC ATTTGGTCTT GTGGAAAGAT TCTTAAAAGG ACTGGAAAAA GTTTTAATTG TTGAAGAACT TGAACCTGTG GTGGAAGAAC AGATAAAGTT ATGGGTATAC GACAAAGGTT TTAATTTGCC AATTTACGGA AAAAATATTG TCCCCAGAAT ATACGAAATG GATACCAAAC GTGCAGTCAA AGCTATTTCA AGATTCTTGA ATATAGACAC ACCTATTGAC TTTGAGGAAT TAGAAAGCAA ATATAAAGAA ATAAGTAGTA TTCTTCCTCC AAGACCACCT TCACTATGTC CAGCGTGTCC ACATAGAAAC TCGTTCTTTG CCATAAACAA AGCAACGGGA AAAAAGGCAA TATATCCAAG TGATATAGGT TGTTATACTT TGGGCGTTTT ACCTCCTTTA AACGCTGTTG ATACAACAGT TGCAATGGGG GGTTCAATTG GCATTGCACA TGGTTTGAGC GTATCGTTAA ATGGTGCCAC AAACGAAGAT ATATACAATA AAAAAGAAGT TGTAGTTGCA ACTATTGGAG ATTCAACATT TTATCATACA GGACTTCCTG CTATTGCAAA CGCAATATAC AATAGATCTA ACATACTAGT AGTTGTGGTA GACAATGAAA TAACTGCTAT GACGGGAGAC CAACCAAATC CAGGTACTGG CGATACACCA CACGGCCTAG GTAAAAGAAT CCCAATTGAA GATGTAGTCA AAGCAATGGG TGCAGATTTT GTTGAAGTGG TAAATCCATA CAACATAAAG AAAACAACAG AAGTTATTAA AAAAGCACTT GAAGTAGAAG GTGTAAGTGT TGTTATCTCA AGACAAGTTT GTGCGTTACA TAGAGTTGGG CAGGCAAAAA AGAAAAAGCA AAAATTACCA ACGTTTAGGG TAAATCCAGA AAAATGTACA GGGTGTAAGG TTTGTATAAC AACATTTGGT TGTCCTGCAA TTTTCTGGGA TAGTGAAAAT AAAAAAGCGA AAATTGATCC AACCATGTGT TGGGGTTGTG GAAGTTGTGC CCAAATATGC CCATTTGGAG CCTTTGAACT TGTAAGGGAG GCGAAATAA
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Protein sequence | MAKVTDMVLL NKPGEKILLL GNHAIARGAL EAGIALFAAY PGTPSSELTD TMASVAKDVG VYMEYSTNEK VAFETALSAA WSGLRSMTAM KHVGLNVAAD SFMSAVGMGV EGGFIVMVAD DPSMWSSQNE QDTRVFGKFA NVPVLEPCSV QEAKDLTKYG FEISEKFKHM VILRTTTRSS HMRGDVVLGK LPDEIVNKKR RVGKFQKDPK RFVDIPAHSK TFHPKILENI EKIREEFNNC PFNKIEGEGK VGIIASGLAY AYVKEAISWL GLKDVKVLKL ATPYPVPFGL VERFLKGLEK VLIVEELEPV VEEQIKLWVY DKGFNLPIYG KNIVPRIYEM DTKRAVKAIS RFLNIDTPID FEELESKYKE ISSILPPRPP SLCPACPHRN SFFAINKATG KKAIYPSDIG CYTLGVLPPL NAVDTTVAMG GSIGIAHGLS VSLNGATNED IYNKKEVVVA TIGDSTFYHT GLPAIANAIY NRSNILVVVV DNEITAMTGD QPNPGTGDTP HGLGKRIPIE DVVKAMGADF VEVVNPYNIK KTTEVIKKAL EVEGVSVVIS RQVCALHRVG QAKKKKQKLP TFRVNPEKCT GCKVCITTFG CPAIFWDSEN KKAKIDPTMC WGCGSCAQIC PFGAFELVRE AK
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