| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0793 |
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| Symbol | |
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| ID | 5298098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 833248 |
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| End bp | 834165 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640769071 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001306040 |
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| Protein GI | 150020686 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTATAATA GTGGAAGGCT TGTGGAAAAT CCAAATTTGG CGAATTTCAT AACATCGGAA
GAATATAAAA TCTTTGATTT TTCATTTTTT ACTGTTGTTC CAAAAAGTTT ATTTTTAAAA
CCACTATATA CTATCATCTT TTTTACAGTT TTTTTGTTGA TGATATTTAT TGTGATTTCG
TATTTTGTAT CTAGGTATAT AACAAATAGA ATTACAGTTT CACTAAGAAA GTTAAGTGAA
AATATGAAAA AATTCGAAAA AAAGGAGTTT AAAAATATTA ATGTGGATGG TTTTGAGGAT
GAGATAAAAA CGTTTCTTAA AGTGTACAAT GATGTTGCAA ATGAACTTGA AAGGTATGTA
GAAAACACAG AACTTATTAT AAAAAATAAA ACGAGGGAAA TAGAGATAAA GAACGAAAAA
TTACGCGAAC TTTCAATTAA AGATGAACTT ACCGGATTGT ACAACAGAAG GTTTTTTAAT
GAAAGTTTTC CAAAGGACTG TAGTTTAGCT TTCAGGGAAA AAATGTATGT AAATTTTGCC
ATTATCGATT TGGATGATTT TAAGGTTATA AATGATACTT ATGGGCATCA AGCAGGTGAT
GAATGTTTAA GAGTTTTTTC AAAGATGTTT AAAGAAAGTT TCCATAGAGA ATCAGACAAA
TATTTTAGGT ATGGAGGAGA AGAGTTTGTA GTTTATTATA TATCAAAAGA AAAGACAAAT
TTTTTTGAAA AATTAGAAAA ATTCAGAAAA GAAGTGGAAA GACATATTTT AGAGTATAAT
GGAGAAAAAA TTACTTTTAC AATTAGTATA GGGGTAGTGG AAGAAAAACA AGAGACTTCC
AGGTATCAAG ACATAATTTC TAAGGCAGAC AAAAATTTAT ATATAGCCAA AAATAAAGGA
AAAAATATAG TAGTATAA
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| Protein sequence | MYNSGRLVEN PNLANFITSE EYKIFDFSFF TVVPKSLFLK PLYTIIFFTV FLLMIFIVIS
YFVSRYITNR ITVSLRKLSE NMKKFEKKEF KNINVDGFED EIKTFLKVYN DVANELERYV
ENTELIIKNK TREIEIKNEK LRELSIKDEL TGLYNRRFFN ESFPKDCSLA FREKMYVNFA
IIDLDDFKVI NDTYGHQAGD ECLRVFSKMF KESFHRESDK YFRYGGEEFV VYYISKEKTN
FFEKLEKFRK EVERHILEYN GEKITFTISI GVVEEKQETS RYQDIISKAD KNLYIAKNKG
KNIVV
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