| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0695 |
|---|
| Symbol | |
|---|
| ID | 5297331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 735101 |
|---|
| End bp | 736129 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640768975 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001305944 |
|---|
| Protein GI | 150020590 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACATTAA GGGAAAAAGT TATTCACAGA TTAAACAACC TTACAAAACC TGTCGGAAGT
TTAGGATATC TCGAAGAAAT AGCACTTAAA ATAGCCTTAA TACAAGAAAA AGAAATTCCG
GAACTTTTTA AAGACAAAAG AGTGTATGTG TTTGTGTCGG ACCATGGTAT TGTCGAAGAA
AATGTTTCGG CTTATCCAAA AGAGGTTACG TATCAAATGG TTTTTAACTT TTTAAACAAA
GGAGCTGCAA TTAACGTCTT CTCTAATCAC GTTGATGCAA ATGTATATGT GGTAGACGCC
GGAGTGGACT ATGATTTTGA AGACCATCCC TTCCTCATTA AAAAGAAAGT GGGGTACGGT
ACAAAAAATT TTTCCAAAGG TCCTGCCATG ACCAAAGATG AGGCACTCCT TTCTATTAAC
TACGGAAGAC AAATTGCAAA TGATGCCATT GAAAGTGGCG CTGATTTACT CGCCATAGGG
GATATGGGAA TAGGTAACAC AACAACGGCA ACGGCAATGG CAGCTGCATT TGGATATAAC
ATAGATGACA TTCTGGATAT AGGAACTCCC ATAGATAATG AAAGGTTAAA AAATAAGAAA
AAAGCGGTAG AAAGGGCAAT AGAGATAAAC AAACCGGATA AAAATGATGC GCTAGATGTA
CTGGCAAAGG TGGGAAGTTA CTGTATAGGT GAGATGGCAG GATTTATATT ACAGGCAGCG
GAAAAGAGGG TTCCGGTGGT AATAGATGGA TTTCCAACGA CAGCGGGATT TTTACTAGCA
TACAAGATGG ATGAAAAAGT AAAGGAATAT GCGTTATTTG GACACAAATC AAAGGTAAAA
GGACATAAGG TGATAATGGA TAGTTTAGGG GTAAGACCGA TATTAGATCT TGATATGAGA
CTTGGAGAAG GTACTGGTGC GGTTTTATCA ATGCCCATTA TAGAAGCTGC AATTAAGATG
ATAAGGGAAA TGGCTACTTT TGAATCTGCA AATGTTTCAA AGGGAGTGGA TCAGGAGGTT
GCAAGATGA
|
|---|
| Protein sequence | MTLREKVIHR LNNLTKPVGS LGYLEEIALK IALIQEKEIP ELFKDKRVYV FVSDHGIVEE
NVSAYPKEVT YQMVFNFLNK GAAINVFSNH VDANVYVVDA GVDYDFEDHP FLIKKKVGYG
TKNFSKGPAM TKDEALLSIN YGRQIANDAI ESGADLLAIG DMGIGNTTTA TAMAAAFGYN
IDDILDIGTP IDNERLKNKK KAVERAIEIN KPDKNDALDV LAKVGSYCIG EMAGFILQAA
EKRVPVVIDG FPTTAGFLLA YKMDEKVKEY ALFGHKSKVK GHKVIMDSLG VRPILDLDMR
LGEGTGAVLS MPIIEAAIKM IREMATFESA NVSKGVDQEV AR
|
|---|
| |