| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0656 |
|---|
| Symbol | |
|---|
| ID | 5296628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 692003 |
|---|
| End bp | 693145 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640768936 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001305905 |
|---|
| Protein GI | 150020551 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACT TAATGACGAA AGAGCAAAAA CTTGCGCAAA AGCTTTTTAA AGAGTTTGCC
GAAAGAGAAG TAAAACCTAT AGCTAAACAA GTAGACGAAG AAGAATATTT TCCTTTTGAG
ACAGTAAAGA AAATGGGACA AATTGGAATG ATGGGAATTC CCTTTCCAAA TGAAGTAGGA
GGAGCTGGAG GGGATTATCT AACTTATATC TTGGCAGTAG AAGAACTTGC AAAGGTATGT
GCAACTACTG CAATAATTTT ATCAGCACAT ACATCTTTAT GTTGTGAGCC TATATATAGA
TTTGGAAATG ATTTTCAAAA AAGAAAATAT CTAATTCCAT TGGTTAAGGG TGCAAAAATT
GGTGCTTTTG CTTTGACAGA GCCTAATGCA GGGACCGATG CGGCAAATCA GCAAACTACT
GCGAAGCTGC AGGGCGAAAA TTACATATTA AATGGTACGA AGATTTTTGT AACAAACGGA
GGGGTTGCAG ATATATATAT TGTTTTTGCT ACGACTAATA GAGAGTTGGG AACTAAGGAT
ATTAGTGCAT TTATTGTGGA AAAGGATTTT GAAGGTTTTA AAATAGGAAA GGTTGAAGAA
AAGATGGGAA TAAGAGGTTC TATGACAACG GAGATTGTTT TAGAAAATTG TATGGTTCCA
AAAGAAAACC TTTTAGGTGC AGAAGGTGAA GGATTTAAGA TTGCGTTAAA AACACTAGAT
GGTGGGAGAA TAGGTGTTGC TGCACAAGCA TTGGGAATTG CGGAAGGTGC GATTGATGAG
GTGTTGAAAT ATGTAAAAGA ACGAAAACAA TTTAATAGAC CTTTAAGTAG TTTTCAAGGT
TTGCAATGGT ATATTGCTGA GATGATTACA AATACACGTG CTGCGAAATT ATTAGTATAC
GATGCGGCGT TAAAAAAAGA TAAAGGACTA TTAAAGAGTG CGGATGCTTC TATGGCAAAG
AAGTTTGCAT CTGATAATGC TATGTTTGTG ACAACTCAAG CTGTTCAAAT TTTTGGTGGT
TATGGATATA TGAAAGATTA TCCCATTGAG AGAATGATGA GAGATGCAAA GATTACTCAA
ATTTATGAAG GAACAAATGA AGTGCAAAAG ATGGTTATTG CAAATCAATA TTTAAGGAGG
TAA
|
|---|
| Protein sequence | MEYLMTKEQK LAQKLFKEFA EREVKPIAKQ VDEEEYFPFE TVKKMGQIGM MGIPFPNEVG
GAGGDYLTYI LAVEELAKVC ATTAIILSAH TSLCCEPIYR FGNDFQKRKY LIPLVKGAKI
GAFALTEPNA GTDAANQQTT AKLQGENYIL NGTKIFVTNG GVADIYIVFA TTNRELGTKD
ISAFIVEKDF EGFKIGKVEE KMGIRGSMTT EIVLENCMVP KENLLGAEGE GFKIALKTLD
GGRIGVAAQA LGIAEGAIDE VLKYVKERKQ FNRPLSSFQG LQWYIAEMIT NTRAAKLLVY
DAALKKDKGL LKSADASMAK KFASDNAMFV TTQAVQIFGG YGYMKDYPIE RMMRDAKITQ
IYEGTNEVQK MVIANQYLRR
|
|---|
| |