Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0589 |
Symbol | secA |
ID | 5296895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 618619 |
End bp | 621180 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640768851 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001305841 |
Protein GI | 150020487 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT TCGACAAGAA TGAGAGAGTT TTAAAAAGGT ACTGGAAAAG GGTAAAAAAG ATAAATGAAA TTAACTTATC TAATGTGCCA TTTAGTGAAC TTATATTAAA TATGGAAAAG ATTAAAAACA ATATAACAGG GGAAAACATA GATGATTACC TTGTAGATGT TTTTGCAATT GTTAGAGAGA TTGCAAAAAG AACAATAGGA TTAAGACCAT TTGATGTGCA ACTTATTGGT GGTATGGTGT TACATGAGGG AAAGGTAGCA GAAATGAAAA CTGGTGAAGG AAAAACACTA GTAGCTACAA TGCCAATTGT TTTAAATGCG TTGCTTAAAA AAGGTGTGCA TCTTGTTACA GTAAATGATT ATCTTGCTAA AAGAGATGCT ATGTGGATGG GGCCTATTTA TCTTGCTTTG GGACTTAGAG TAGCTGTTAT AAATACCCAA AACAAATCTT ATGAAGTTGT CTGGAAAAAT AAAGAACTTT TCGAGAAGGC AATTAGAGAA AATCTAAGTG TATGGCCAGA AGGTTTTGCT GAAGAATTTT TGCCTGATGA TAAAAAGGTA AATACAGATT GTTTTGATGT AGAATTAAAA GAAATTACTA GAAAAGAAGC ATACGAATGC GATATTACAT ACGGGACAAA TACAGAATTT GGATTCGATT ATTTAAGAGA TAACCTAGTG ATTAATTTGG ATTCTCGTGT TCAAAGAGGC CATTTTTTTG CGATTGTCGA TGAAGTAGAT AGTATACTTA TTGATGAAGC TCGAACACCA TTAGTAATAA GTGGGCCTTC TAAGACTAAA GCATCAGATT ACAGAAGGTT CAACCAAGTT GCAAAGAGAT TGAAAAAAGA TGTCCATTTT ACAGTGGATG AGAAGAAAAA GACAGTTGTT TTAACAGATG AAGGGATAGA GTATGTTGAA AAATTGCTGA ACATAGAGAA TCTTTACGAT CCAGAACATG TGAATAAAAT GTATTTTCTT TTAAATGCAC TTAAAGCTCA TCATTTATTT AAAAAGGATG TTGACTACAT TGTCAACAAT GGAGAAGTTA TTATAGTTGA CGAGTTTACT GGGAGATTGT TACCTGGTAG AAGGTACAGC GGAGGCCTCC ATCAGGCAAT AGAAGCAAAA GAAGGTGTGC CAATAAAAGA AGAATCTTTA ACATATGCAA CTATAACCTA TCAAAACTAT TTTAGAATGT ATAAAAAATT GGCGGGAATG ACTGGGACGG CAAAGACTGA GGAAGAAGAG TTTAAACAAA TATATGGAAT GGAAGTAGTT GTAATTCCTA CTCATAAACC TATGATTAGA AAAGATAGGG ATGATTTAAT ATATAGAACA GAAGAGGAGA AATTCCAGGC AGTAGTAAGT GAAATAAAAA AAAGGCATGA GAAAGGTCAA CCGGTGTTAG TTGGAACAAC ATCTATTGAG AAAAGTGAAA GATTAAGTCA AATGTTAAAA AAGGAAAATA TACCGCATAA CGTTCTTAAT GCAAAGTATC ATGAAAAAGA AGCGGAAATT GTTGCACGAG CTGGACAAAG GGGAGCTGTA ACTATAGCAA CGAATATGGC AGGTAGAGGT ACTGATATAA AATTGGGGCC GGGTGTTAAA GAGCTTGGCG GGTTGTTAAT AATAGGTACA GAAAGGCATG AAAGTAGAAG GATAGATAAT CAACTTAGGG GAAGAGCGGG TAGACAGGGT GATCCAGGAG AATCTATATT CTTTCTTTCT CTTGAGGATG ATATAATTAG GATTTTTGGT GGAGAAAAGC TCGAAAAAAT AATGAATTTG GTTAAAATTG AAAAAGGAGA ACCTATTTAT CATCCAATGC TCACAAAGCT CATTGAAAGG GTTCAGAAGA AAGTGGAAAG TATAAACTTT GCAATTAGAA AGAATTTATT ACAAATGGAT ACAGTATTAG ATGCTCAAAG AAAAGCTATT TACAGCTATA GAGAATATTT ACTTTCTGGA AATCTAGACG AGCACTTTTA TGATGCAATG GAGGATTTCA TAGAGAGGAT ATTGGAAGAA TTTTGTGAAA AAGAAGTGTG TGATACTCAG AAGATAAACG AATCGTTGAA AATTTTGAAT ATAGACGAAA AATTACCGGA TACAAGAGAA GAAACAAAAA AATATTTAAA AGATATTATA TTAAAGAGAT ATAATAAGAA GAAAGAAGAA TTAGGTGAAG ATTTTTCAAA AATAGGAAAA TACATTGCTC TTAGAGTTTT GGATGAAAAT TGGAGACAAT ATCTTGAAGA AGTTGAACAT GTGAAAGAAG CAGTAAGCCT TAGAGCATAT GGCCAAAAGG ATCCAATAAT CGAGTTTAAA AAGGAAACAT TTAGAATGTT TGATGAAATG ATGGCAAGAA TATATGAACA ATCTATTGTG TATACCTTAA ACATAAGAAA AATAACAGAT GAAGCGGAAA AAGAATCTAA AAAGGAACTT GAAAAGTTAT ACGTACAACA CGATGAATTT AGTCTTGTTA ACAGAAAAGA GAGAAGAACA GCAGAAAAGA AAGGGAAAAA AAGGTTAAAG GTTAAGAGGT GA
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Protein sequence | MKLFDKNERV LKRYWKRVKK INEINLSNVP FSELILNMEK IKNNITGENI DDYLVDVFAI VREIAKRTIG LRPFDVQLIG GMVLHEGKVA EMKTGEGKTL VATMPIVLNA LLKKGVHLVT VNDYLAKRDA MWMGPIYLAL GLRVAVINTQ NKSYEVVWKN KELFEKAIRE NLSVWPEGFA EEFLPDDKKV NTDCFDVELK EITRKEAYEC DITYGTNTEF GFDYLRDNLV INLDSRVQRG HFFAIVDEVD SILIDEARTP LVISGPSKTK ASDYRRFNQV AKRLKKDVHF TVDEKKKTVV LTDEGIEYVE KLLNIENLYD PEHVNKMYFL LNALKAHHLF KKDVDYIVNN GEVIIVDEFT GRLLPGRRYS GGLHQAIEAK EGVPIKEESL TYATITYQNY FRMYKKLAGM TGTAKTEEEE FKQIYGMEVV VIPTHKPMIR KDRDDLIYRT EEEKFQAVVS EIKKRHEKGQ PVLVGTTSIE KSERLSQMLK KENIPHNVLN AKYHEKEAEI VARAGQRGAV TIATNMAGRG TDIKLGPGVK ELGGLLIIGT ERHESRRIDN QLRGRAGRQG DPGESIFFLS LEDDIIRIFG GEKLEKIMNL VKIEKGEPIY HPMLTKLIER VQKKVESINF AIRKNLLQMD TVLDAQRKAI YSYREYLLSG NLDEHFYDAM EDFIERILEE FCEKEVCDTQ KINESLKILN IDEKLPDTRE ETKKYLKDII LKRYNKKKEE LGEDFSKIGK YIALRVLDEN WRQYLEEVEH VKEAVSLRAY GQKDPIIEFK KETFRMFDEM MARIYEQSIV YTLNIRKITD EAEKESKKEL EKLYVQHDEF SLVNRKERRT AEKKGKKRLK VKR
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