Gene Tmel_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0589 
SymbolsecA 
ID5296895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp618619 
End bp621180 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content33% 
IMG OID640768851 
Productpreprotein translocase subunit SecA 
Protein accessionYP_001305841 
Protein GI150020487 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TCGACAAGAA TGAGAGAGTT TTAAAAAGGT ACTGGAAAAG GGTAAAAAAG 
ATAAATGAAA TTAACTTATC TAATGTGCCA TTTAGTGAAC TTATATTAAA TATGGAAAAG
ATTAAAAACA ATATAACAGG GGAAAACATA GATGATTACC TTGTAGATGT TTTTGCAATT
GTTAGAGAGA TTGCAAAAAG AACAATAGGA TTAAGACCAT TTGATGTGCA ACTTATTGGT
GGTATGGTGT TACATGAGGG AAAGGTAGCA GAAATGAAAA CTGGTGAAGG AAAAACACTA
GTAGCTACAA TGCCAATTGT TTTAAATGCG TTGCTTAAAA AAGGTGTGCA TCTTGTTACA
GTAAATGATT ATCTTGCTAA AAGAGATGCT ATGTGGATGG GGCCTATTTA TCTTGCTTTG
GGACTTAGAG TAGCTGTTAT AAATACCCAA AACAAATCTT ATGAAGTTGT CTGGAAAAAT
AAAGAACTTT TCGAGAAGGC AATTAGAGAA AATCTAAGTG TATGGCCAGA AGGTTTTGCT
GAAGAATTTT TGCCTGATGA TAAAAAGGTA AATACAGATT GTTTTGATGT AGAATTAAAA
GAAATTACTA GAAAAGAAGC ATACGAATGC GATATTACAT ACGGGACAAA TACAGAATTT
GGATTCGATT ATTTAAGAGA TAACCTAGTG ATTAATTTGG ATTCTCGTGT TCAAAGAGGC
CATTTTTTTG CGATTGTCGA TGAAGTAGAT AGTATACTTA TTGATGAAGC TCGAACACCA
TTAGTAATAA GTGGGCCTTC TAAGACTAAA GCATCAGATT ACAGAAGGTT CAACCAAGTT
GCAAAGAGAT TGAAAAAAGA TGTCCATTTT ACAGTGGATG AGAAGAAAAA GACAGTTGTT
TTAACAGATG AAGGGATAGA GTATGTTGAA AAATTGCTGA ACATAGAGAA TCTTTACGAT
CCAGAACATG TGAATAAAAT GTATTTTCTT TTAAATGCAC TTAAAGCTCA TCATTTATTT
AAAAAGGATG TTGACTACAT TGTCAACAAT GGAGAAGTTA TTATAGTTGA CGAGTTTACT
GGGAGATTGT TACCTGGTAG AAGGTACAGC GGAGGCCTCC ATCAGGCAAT AGAAGCAAAA
GAAGGTGTGC CAATAAAAGA AGAATCTTTA ACATATGCAA CTATAACCTA TCAAAACTAT
TTTAGAATGT ATAAAAAATT GGCGGGAATG ACTGGGACGG CAAAGACTGA GGAAGAAGAG
TTTAAACAAA TATATGGAAT GGAAGTAGTT GTAATTCCTA CTCATAAACC TATGATTAGA
AAAGATAGGG ATGATTTAAT ATATAGAACA GAAGAGGAGA AATTCCAGGC AGTAGTAAGT
GAAATAAAAA AAAGGCATGA GAAAGGTCAA CCGGTGTTAG TTGGAACAAC ATCTATTGAG
AAAAGTGAAA GATTAAGTCA AATGTTAAAA AAGGAAAATA TACCGCATAA CGTTCTTAAT
GCAAAGTATC ATGAAAAAGA AGCGGAAATT GTTGCACGAG CTGGACAAAG GGGAGCTGTA
ACTATAGCAA CGAATATGGC AGGTAGAGGT ACTGATATAA AATTGGGGCC GGGTGTTAAA
GAGCTTGGCG GGTTGTTAAT AATAGGTACA GAAAGGCATG AAAGTAGAAG GATAGATAAT
CAACTTAGGG GAAGAGCGGG TAGACAGGGT GATCCAGGAG AATCTATATT CTTTCTTTCT
CTTGAGGATG ATATAATTAG GATTTTTGGT GGAGAAAAGC TCGAAAAAAT AATGAATTTG
GTTAAAATTG AAAAAGGAGA ACCTATTTAT CATCCAATGC TCACAAAGCT CATTGAAAGG
GTTCAGAAGA AAGTGGAAAG TATAAACTTT GCAATTAGAA AGAATTTATT ACAAATGGAT
ACAGTATTAG ATGCTCAAAG AAAAGCTATT TACAGCTATA GAGAATATTT ACTTTCTGGA
AATCTAGACG AGCACTTTTA TGATGCAATG GAGGATTTCA TAGAGAGGAT ATTGGAAGAA
TTTTGTGAAA AAGAAGTGTG TGATACTCAG AAGATAAACG AATCGTTGAA AATTTTGAAT
ATAGACGAAA AATTACCGGA TACAAGAGAA GAAACAAAAA AATATTTAAA AGATATTATA
TTAAAGAGAT ATAATAAGAA GAAAGAAGAA TTAGGTGAAG ATTTTTCAAA AATAGGAAAA
TACATTGCTC TTAGAGTTTT GGATGAAAAT TGGAGACAAT ATCTTGAAGA AGTTGAACAT
GTGAAAGAAG CAGTAAGCCT TAGAGCATAT GGCCAAAAGG ATCCAATAAT CGAGTTTAAA
AAGGAAACAT TTAGAATGTT TGATGAAATG ATGGCAAGAA TATATGAACA ATCTATTGTG
TATACCTTAA ACATAAGAAA AATAACAGAT GAAGCGGAAA AAGAATCTAA AAAGGAACTT
GAAAAGTTAT ACGTACAACA CGATGAATTT AGTCTTGTTA ACAGAAAAGA GAGAAGAACA
GCAGAAAAGA AAGGGAAAAA AAGGTTAAAG GTTAAGAGGT GA
 
Protein sequence
MKLFDKNERV LKRYWKRVKK INEINLSNVP FSELILNMEK IKNNITGENI DDYLVDVFAI 
VREIAKRTIG LRPFDVQLIG GMVLHEGKVA EMKTGEGKTL VATMPIVLNA LLKKGVHLVT
VNDYLAKRDA MWMGPIYLAL GLRVAVINTQ NKSYEVVWKN KELFEKAIRE NLSVWPEGFA
EEFLPDDKKV NTDCFDVELK EITRKEAYEC DITYGTNTEF GFDYLRDNLV INLDSRVQRG
HFFAIVDEVD SILIDEARTP LVISGPSKTK ASDYRRFNQV AKRLKKDVHF TVDEKKKTVV
LTDEGIEYVE KLLNIENLYD PEHVNKMYFL LNALKAHHLF KKDVDYIVNN GEVIIVDEFT
GRLLPGRRYS GGLHQAIEAK EGVPIKEESL TYATITYQNY FRMYKKLAGM TGTAKTEEEE
FKQIYGMEVV VIPTHKPMIR KDRDDLIYRT EEEKFQAVVS EIKKRHEKGQ PVLVGTTSIE
KSERLSQMLK KENIPHNVLN AKYHEKEAEI VARAGQRGAV TIATNMAGRG TDIKLGPGVK
ELGGLLIIGT ERHESRRIDN QLRGRAGRQG DPGESIFFLS LEDDIIRIFG GEKLEKIMNL
VKIEKGEPIY HPMLTKLIER VQKKVESINF AIRKNLLQMD TVLDAQRKAI YSYREYLLSG
NLDEHFYDAM EDFIERILEE FCEKEVCDTQ KINESLKILN IDEKLPDTRE ETKKYLKDII
LKRYNKKKEE LGEDFSKIGK YIALRVLDEN WRQYLEEVEH VKEAVSLRAY GQKDPIIEFK
KETFRMFDEM MARIYEQSIV YTLNIRKITD EAEKESKKEL EKLYVQHDEF SLVNRKERRT
AEKKGKKRLK VKR