Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0541 |
Symbol | |
ID | 5298039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 576956 |
End bp | 577987 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768802 |
Product | ApbE family lipoprotein |
Protein accession | YP_001305793 |
Protein GI | 150020439 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAAAC TATCAAAAAT TTCACTAGCT TCTACTATTT TATTAATTTC AATGATTATT ATAGTTTTAG TTGTAGTAGT ATTTTTTAAG AAAACATCCA GGTATGAAAC TTTTGAAACT TTTTCGCTTG GAACTTATGT ACAACTAAGA ATATCTACAA AAGCCAACGC CTCAATTATT GCTAGGGAAA TATTCCAAGA ATTTGATAGA ATTACAAAAA AATTTAATCC TTATAACCCT GAATCGGTTA TTTACAAGTT AAATAATAGC ACTGATTGGG TAGAAGTTGA TGACGAAACA TTCGCAGTTA TAGATTTGTC TTTACAGTAT GCAAAAATGA CTAGAGGTTC TTTTGACCCA ACTCTTGGAA GACTTATCAA ACTTTGGGGA TTTGATAAAT TTTCAGAAGA AGATAAACAA TTTAAAGTTC CAAATAACGA AGAAATAAAA AATGCTTTGG AAAATTCTGG CTTTGAAAAG GTAGAGATAG ATTACAAAAA CAGAAAGATA AAAACCAATG GCGTTTGGTT TGACTTAGGT GGAATAGCAA AGGGTTATGC ACTTGAAAGA GCTTATCAAA TTGCTAAAGA AGCTGATAGA GAGTGCACAG GTTTTATTGA AGCAGGCGGA GATATAAGGA TTTTAGGCCC AAAATTTGGA AAAGACTATT GGATTATAGG TATTAGAAAT CCTAGAGGAA ATGACAGTAT AGACTATATA TATTTAAAAA ATGGGGCAGT TGCAACTAGT GGAGATTATG AAAGATATTT TGAAATAGGC GAAAAAAGAT ATCACCATTT ACTTGATAGA AATACAGGTT ATCCTGCATT AGGAGCTATA AGTGCAACAG TTATTGCAGA TGACGCAATA AAAGCTGATG CTTTTTCTAC AGCCGCTTTT ATTTTAGGAA AGGATAAATG GCTGTACACA CGAACTATAT TACCCAAAGA AAATGCAGAA ATATTTTTAG TTACAAATGA ACAAAAAATT TTAAAAACAG ACGGATTTGA ATATTATGAA AATACATATT AA
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Protein sequence | MNKLSKISLA STILLISMII IVLVVVVFFK KTSRYETFET FSLGTYVQLR ISTKANASII AREIFQEFDR ITKKFNPYNP ESVIYKLNNS TDWVEVDDET FAVIDLSLQY AKMTRGSFDP TLGRLIKLWG FDKFSEEDKQ FKVPNNEEIK NALENSGFEK VEIDYKNRKI KTNGVWFDLG GIAKGYALER AYQIAKEADR ECTGFIEAGG DIRILGPKFG KDYWIIGIRN PRGNDSIDYI YLKNGAVATS GDYERYFEIG EKRYHHLLDR NTGYPALGAI SATVIADDAI KADAFSTAAF ILGKDKWLYT RTILPKENAE IFLVTNEQKI LKTDGFEYYE NTY
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