Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0531 |
Symbol | |
ID | 5298114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 568776 |
End bp | 569555 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640768792 |
Product | hypothetical protein |
Protein accession | YP_001305783 |
Protein GI | 150020429 |
COG category | [S] Function unknown |
COG ID | [COG1469] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00294] conserved hypothetical protein TIGR00294 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGACG TACAAAGTGA AAAGGATACC AGAGAAATTC CATTAAAACA TGTTGGAATA AAAAAATTGA AATATCCCGT ACAGGTGCTT GATAGGGAAA ATAAGGTTCA AAATACAGTA GCAGATATAA ATATGTATGT AGATCTTCCA AAGGATTTTA GAGGAACGCA CATGAGCAGG TTTTTGGAAG TGTTTAACAA ATTTCATTTA AAAATAGACC CTAAAACGAT TAAAAAGATT TTAGACGATT TAAAACAAAC ATTAAAAGCG CAAAGTGCAA AAATTGAGAT AATGTTCCCG TATTTTTTAA AGAAAAAAGC ACCTGTAACA AAAATAGAAA GCTACATGGA ATATTTATGT GGTTTTAGTG CATATGATGG TCCACAAAAA TGTGAATTTT ATACAATAGT TGAAGTCTCA GTTCAAACAT TGTGTCCATG TTCAAAAGAG ATAAGTAAAT ATAATGCACA CAATCAAAGA GCGAACGTAA GGATAGAGGT AGAAACTTCT GAACTTGTAT GGTTTGAGGA ACTTATAGAA ATTGCTGAAG ATTCCGCAAG TGTTCCTTTA TTTTCGCTGT TAAAAAGACC AGATGAAAAG TTTGTTACAG AAAAAGCCTA TGAAAATCCA AAATTTGTTG AAGATGTGGC AAGGGATATA GCAATCAGGT TAAAAGATAA TCCAAAGATT AATTGGTTTA AGGTTGAGGT GGAAAGCTAC GAATCAATAC ATAATCATAA TGCATTTGCA TGTGTAGATT CAACAATAAT GGAGGTGTAA
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Protein sequence | MKDVQSEKDT REIPLKHVGI KKLKYPVQVL DRENKVQNTV ADINMYVDLP KDFRGTHMSR FLEVFNKFHL KIDPKTIKKI LDDLKQTLKA QSAKIEIMFP YFLKKKAPVT KIESYMEYLC GFSAYDGPQK CEFYTIVEVS VQTLCPCSKE ISKYNAHNQR ANVRIEVETS ELVWFEELIE IAEDSASVPL FSLLKRPDEK FVTEKAYENP KFVEDVARDI AIRLKDNPKI NWFKVEVESY ESIHNHNAFA CVDSTIMEV
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