Gene Tmel_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0531 
Symbol 
ID5298114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp568776 
End bp569555 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content32% 
IMG OID640768792 
Producthypothetical protein 
Protein accessionYP_001305783 
Protein GI150020429 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGACG TACAAAGTGA AAAGGATACC AGAGAAATTC CATTAAAACA TGTTGGAATA 
AAAAAATTGA AATATCCCGT ACAGGTGCTT GATAGGGAAA ATAAGGTTCA AAATACAGTA
GCAGATATAA ATATGTATGT AGATCTTCCA AAGGATTTTA GAGGAACGCA CATGAGCAGG
TTTTTGGAAG TGTTTAACAA ATTTCATTTA AAAATAGACC CTAAAACGAT TAAAAAGATT
TTAGACGATT TAAAACAAAC ATTAAAAGCG CAAAGTGCAA AAATTGAGAT AATGTTCCCG
TATTTTTTAA AGAAAAAAGC ACCTGTAACA AAAATAGAAA GCTACATGGA ATATTTATGT
GGTTTTAGTG CATATGATGG TCCACAAAAA TGTGAATTTT ATACAATAGT TGAAGTCTCA
GTTCAAACAT TGTGTCCATG TTCAAAAGAG ATAAGTAAAT ATAATGCACA CAATCAAAGA
GCGAACGTAA GGATAGAGGT AGAAACTTCT GAACTTGTAT GGTTTGAGGA ACTTATAGAA
ATTGCTGAAG ATTCCGCAAG TGTTCCTTTA TTTTCGCTGT TAAAAAGACC AGATGAAAAG
TTTGTTACAG AAAAAGCCTA TGAAAATCCA AAATTTGTTG AAGATGTGGC AAGGGATATA
GCAATCAGGT TAAAAGATAA TCCAAAGATT AATTGGTTTA AGGTTGAGGT GGAAAGCTAC
GAATCAATAC ATAATCATAA TGCATTTGCA TGTGTAGATT CAACAATAAT GGAGGTGTAA
 
Protein sequence
MKDVQSEKDT REIPLKHVGI KKLKYPVQVL DRENKVQNTV ADINMYVDLP KDFRGTHMSR 
FLEVFNKFHL KIDPKTIKKI LDDLKQTLKA QSAKIEIMFP YFLKKKAPVT KIESYMEYLC
GFSAYDGPQK CEFYTIVEVS VQTLCPCSKE ISKYNAHNQR ANVRIEVETS ELVWFEELIE
IAEDSASVPL FSLLKRPDEK FVTEKAYENP KFVEDVARDI AIRLKDNPKI NWFKVEVESY
ESIHNHNAFA CVDSTIMEV