Gene Tmel_0505 details

Gene Information

• Locus tag: Tmel_0505
• ID: 5298380
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 539155
• End bp: 539784
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 23%
• IMG OID: 640768766
• Product: WbqC-like family protein
• Protein accession: YP_001305757
• Protein GI: 150020403

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000101608
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATA AAGTAGATTT TTTTGTTTTT TTGGATGATG TACAATATAC AAAACATGAT 
TGGAGAAATA GAAATAAGAT AAAAACTCCA AATGGTTTAA GATGGATTAC GGTACCCGTA 
AAATCAAATA GTATAAAACA AAAAATAAAT GAAGTAGAAG TCTCTCAAAG AGTTAATTGG 
CAAAAAAAAC ATTATAATTC ATTTATAGCA AATTATTCAA AAGCAAAATA TTTTAAAGAT 
TTTGAGTTTT TGTTGGAAGA TTTTTATATA ACAAATAAAT GGAAAAAACT GTCTGATCTT 
GATATTTATA CAACAATAAA AATTTCAGAA ATTCTTAGAA TAAATACGAA TTTTTTGAAA 
AGTTCAGAGT TTAAGATTAA AGAAAAAGAT AAAAACCGTA GATTAATAGA AATAATAAAG 
TTATTAAAAG GAAAAATTTA TATAACAGGC CCATCGGCTA AAAATTATTT GAATATTGAA 
CTTTTTGAAA AAAATGGTAT AGAAGTACGT TTCATGGAAT ATAAATATCC TGAGTATCAA 
CAGTTATATG AAGGTTTTAT ACACGAGGTT ACTGTTTTAG ATGTATTATT TAATTGTGGG 
GATAGATCAC CATTTTATAT ATTTACATAG 

 

Protein sequence

MINKVDFFVF LDDVQYTKHD WRNRNKIKTP NGLRWITVPV KSNSIKQKIN EVEVSQRVNW 
QKKHYNSFIA NYSKAKYFKD FEFLLEDFYI TNKWKKLSDL DIYTTIKISE ILRINTNFLK 
SSEFKIKEKD KNRRLIEIIK LLKGKIYITG PSAKNYLNIE LFEKNGIEVR FMEYKYPEYQ 
QLYEGFIHEV TVLDVLFNCG DRSPFYIFT