| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0475 |
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| Symbol | |
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| ID | 5298211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 500973 |
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| End bp | 501926 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768736 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001305727 |
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| Protein GI | 150020373 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00102618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ACCTTTTTCT AATTTTTTTA CTAATCTCTG CAAATTATTT TTCATTTATG
CTTGATCCTT TGAACTATAT TACCAAAACC AACCTTGGAT TGCAAGTACA ATTTTATAAC
AATGCTGGGA AAATATCTAT ATATAATCCG TTTGTTTACA GAATTGTTTC ATATGATACA
TTTACCAACA CAATGCGATT TCCTGAGATA GTAAAGGGAC TTGCATACAT TGAATCGGGC
TTCAATATCC ACGCACTTTC AAATGTTGGA GCAATGGGAA TAGCACAATT TAAAGCAGAT
GCAGCACTAG ATTATGGTAT TAACAATGCC TGGAATCCAA AACAAGCACT TCTTGGTGCA
GACAGAATGA TAAGATATTA TTATCAGAAA TACAACGATA TATACTCAGT TCTTGCGATA
TATAACATAG GAGAGGGAAA TTACAAAAAA GGTAAATATC TAGATGAAGG CAAAAATTAT
GCAAATAAAG TTATATCAGC CTCAAGAAAA ATAAGTAGAA ATGTCTACCT AAAAGATAAA
TATGTATTAT ATCTTCAAGC AGGGTTAGAT AGTACTAATA CTACATTCTT TGAAATTGGT
TCTATCTTTG ACTATTTAGG ACTTTTATAC TTTGATTTAT CTACAAAATT TTCAATTGAA
GAAACTGGAT ACCCAATTGA ATTTGGAGCA AAATCTTTTT TTAGATTAGA CCATTTCTCT
TCAATTGTGT TTGGATATAA TTTAAGGTAT AATAATAATA TATCAGTTGG TCCGATAATT
GGTTACTCCT ACTTTGAACC AGTTGGCCCA AACTATGAAA TTTGCTATGA TTTTTCGAAA
GGCTTTGATA TGAAAAACTT TCAATTTGAC GTTGGTTATG GAAACAAGTA TTGGCGAATT
AGCTTAGGAT ATGACACTGA TTTCGAGAAT TTTTATCTGA GGTTTTTATA TTGA
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| Protein sequence | MKKNLFLIFL LISANYFSFM LDPLNYITKT NLGLQVQFYN NAGKISIYNP FVYRIVSYDT
FTNTMRFPEI VKGLAYIESG FNIHALSNVG AMGIAQFKAD AALDYGINNA WNPKQALLGA
DRMIRYYYQK YNDIYSVLAI YNIGEGNYKK GKYLDEGKNY ANKVISASRK ISRNVYLKDK
YVLYLQAGLD STNTTFFEIG SIFDYLGLLY FDLSTKFSIE ETGYPIEFGA KSFFRLDHFS
SIVFGYNLRY NNNISVGPII GYSYFEPVGP NYEICYDFSK GFDMKNFQFD VGYGNKYWRI
SLGYDTDFEN FYLRFLY
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