| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0470 |
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| Symbol | |
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| ID | 5297034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 496557 |
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| End bp | 497300 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768731 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001305722 |
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| Protein GI | 150020368 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATGA GAAGATGGGT TGCTGTTTTT GTGTTTTTGA TAATTGTAGG AGTTATTTTT
GGAGGCACTT TATCAGAAAT AAAAGAAAGA GGAAAACTTA TTATTGGTAC TGAGCCAACT
TTTCCGCCCT TTGAATATGT GGATAAAGAT AACAATATAG TTGGTTTTGA CATTGATATT
GCCAAAAAAA TTGCAGAAGA ACTTGGAGTA GAACTTGAGA TTGTTAATCT ACCGTTTGAT
TCTCTAATTC CTGCTATTAT GTCTGACAAA ATTGATTTAA TAATAGCTGG TATGACTATA
ACAAAAGAGA GAGCAAAAGT AATAGATTTT TCTATCCCAT ATTTTAATGC AAACCAATCA
ATTGTTGTTA GAAAAGGTGA AAGTTTTTCT CCAAAAAGTC TTAATGAATT AGTTGGAAAA
CGCGTTGCAG TACAACTTGG TACAACGGGT GATCTTGTCG TATCTGATAT TAAGAGAATA
AAAATTACGA GATTTCAGAA GTTTACCGAT GCATTTCTTG AACTTCAAAA CAAACGTGTT
GATGCAGTTG TTTTGGATGA GGCTGTGGCA AGGGCATATG TAAAAAAATT TCCAAAATTT
GAAGTTTCCA CGGTAATAGA TACAGGAGAA AAATATGGAA TAGGGGTTAA AAAGGAAAAT
ACCGAATTAC TTGAATTTGT AAATAAGGTA ATTTCGAATT TATTTAAAAG CCCGTATGAT
GTGTTAGTTG AAAAATGGTT TTAA
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| Protein sequence | MGMRRWVAVF VFLIIVGVIF GGTLSEIKER GKLIIGTEPT FPPFEYVDKD NNIVGFDIDI
AKKIAEELGV ELEIVNLPFD SLIPAIMSDK IDLIIAGMTI TKERAKVIDF SIPYFNANQS
IVVRKGESFS PKSLNELVGK RVAVQLGTTG DLVVSDIKRI KITRFQKFTD AFLELQNKRV
DAVVLDEAVA RAYVKKFPKF EVSTVIDTGE KYGIGVKKEN TELLEFVNKV ISNLFKSPYD
VLVEKWF
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