Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0449 |
Symbol | |
ID | 5297669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 473594 |
End bp | 474778 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640768710 |
Product | hypothetical protein |
Protein accession | YP_001305701 |
Protein GI | 150020347 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.964964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGT TAATACTTGT TCTTTTGGTT TTGGTAAGTA TTTCATTTGC AATTACAGTT AGCGAAAAAA CGGGGATAGT TATTTTACCT GCAAAGGTTG GTAATGGATG GAATATGGAT GAAGCAGATT ATTTGATTTC ACTGCTTGAA GAAAAGGCAT TATCACTTGG AAGGTTTAGA GTATATTCAA GAAACGATCT AGATGCTATT GTAAAAGAAA GAAATTTATC TGAACTCGGT ATTGTTGAAA AAACTTTTGA AGCTGGAAAA ATTCTTGGCG CAAAGTATGC AATATTACTT ACTCTAACTG AATTAACATC TCAATATGAA GATAATGGAT ACACAGCAAG CTTAAGGTTA TCGTTGAAAT TGTATGATTT AAGTAGTGGT GAGCTGCTTG CCGCAAAAAC ATTTGATGAT AGCACATACG TCGAAGAAGA AACCGCCCAA AAAGCTATAA ATAGTCTTTT AGAGTTGGTT TCGGAAAAAA TTTGGCTTAC CTTAAGAGAA TTTTTCAAAG TGGAAGCTTA TGTAAAAAGT GTTGAAGATG GAAAGGTATA TCTCGCTGGA TTAGAGCCAA ATATTGTAAA GAAAGGATTT ATATTCAAAA TTGAAACTTC CGATGGTGAT GTTGCTTATG TAGAAGTAAT TGGAATTGAC AGAAAAGAAA ATCTTGTAGT CACAAAATTC AAATACGGTG GAACTCCAGA GGTTTTTGAT CCAGCTATAG AATATCCCAT ATCTGGAACG TACGGAGGAT TTTCAATTGG AATGTACTCT GGAAAAATAT CAATTGGAAT CTCTGGATTC CAAAATAATT TGTTTGTAGA TGCTGGTATT ATTCTTGCAT CTGAAATGGG TTATGTTCCA TGGTATACAA CTGTTGGTGG TCTTTTAAAG TTTGCTGAGA TGGGACAAAT AAGCCTCTCT GGTTTTGGTG GCCTTCAACT ACTTGGCATT TACAACACCA ACAGTGATAG TAATGATTCG TTTTTAAATG TTTTTGGTAT AAACGCAGGA GTGCAAATAA AGTATGAATT TGAACCAAAA AATGGAATTT TTATCAATGC AGGATACACC ATGTTATTTC TAGGAGATGT TGTCCAAAAT ATTTACAATA TCTTGTTTGG TATTGACAAT ACATCTTTTG TACAATTTAA CATTGGCTAC TTTATGGCAT TTTAG
|
Protein sequence | MKKLILVLLV LVSISFAITV SEKTGIVILP AKVGNGWNMD EADYLISLLE EKALSLGRFR VYSRNDLDAI VKERNLSELG IVEKTFEAGK ILGAKYAILL TLTELTSQYE DNGYTASLRL SLKLYDLSSG ELLAAKTFDD STYVEEETAQ KAINSLLELV SEKIWLTLRE FFKVEAYVKS VEDGKVYLAG LEPNIVKKGF IFKIETSDGD VAYVEVIGID RKENLVVTKF KYGGTPEVFD PAIEYPISGT YGGFSIGMYS GKISIGISGF QNNLFVDAGI ILASEMGYVP WYTTVGGLLK FAEMGQISLS GFGGLQLLGI YNTNSDSNDS FLNVFGINAG VQIKYEFEPK NGIFINAGYT MLFLGDVVQN IYNILFGIDN TSFVQFNIGY FMAF
|
| |