| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0446 |
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| Symbol | |
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| ID | 5297939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 467309 |
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| End bp | 470521 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768707 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001305698 |
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| Protein GI | 150020344 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACTTTA AAGATATATT TCTTAATATT ACAATTGTGC TAGTTGCACT ATTTGCGAGT
CCAAAATTAA CGTATGAATT TAGTGTACCA AAGTATGCTA TATTAACCTT TGCTTTCTCG
GTTTTATTTA CATATCTTGC GGCAAAAGTA ATAAAAGAAA AAAAGATAAG TATCTATATA
TCACCTGCTC ATATAATTTG GTTTTTCTTT GCAATTTCTT CCATAATTTC AAGCTTTAAC
ACACTTAGGG ATAACCCATT TTATTTTAGA CAATCGTTTG ATATAGGTCT TTATGTTTTG
TTTAACGTAC TTGTTGCTTT TTACATAAGT AGTGAATATA ATGAGAAAAA GAGAATAAAT
ATTCTTCTTT TCACATTTAT GTTGACAGGG TTATTTATTT CAATAGATGC TCTCTTAAAT
TTTTATATAG GGTATGATAT TTTTCTTGGT AAAGTAGGCC AACCACTTTC TAGAGGTTCA
ATAAAAGCAA GTGTGGGAAA TGTCATCTTT GTTGCAAACT ACATTGATAT GCTTCTCCCA
ATTGCGCTTT ACTTTTTACT TGCATATGAT TTAGGAGTAA AAAAATTTTG GCAAGTTAGT
TTGATAAAGT TATCTTCGCT GGTAAGTTTT ATCTTGGGAT TAATGGCTGT TATAGTTTCA
CAGACAAGGT CTGAGTATCT TGCAATAATT GTCATGAGTG TTATGTATGT CATTTTCTAC
TTTGTTTGGA GAAAGAAGTC TTCTCCAATA CCACAGATAA AAAAATTGAC AAACTTACTT
TTAATAGTTT TGTTAATTGT TTCAGTATTT ATAGTTTTAA TATACAATAC GGAAAATCCT
TTGACTGGAC AAGGTAAGGT AAATATGACT AATAGATTTT CTGCTATGGC CTCAGTTTCA
AGTAGAGATG AAAGATTCCT TTCTTGGTTT ACGTCGCTGG AGTTATGGGA AGATCACAAA
ATATTTGGAA CGGGAATAGG GACGTACCAA CTTTTATCAC TTACAAAGAT GGGAGAATAC
CTTGAAAAGC ACCCAGAATT ATACTACGGT TGGAACAATT TTAAAAGAGC ACACAACGAT
TATTTCCAAG TACTTGGTGA AACGGGAATC GTTGGTCTTT CCCTTATAAT ACTCCTTTTA
GCTTTTCTTG TGTATTACTT TTTTACCATT CCAAAGAAAA TTGAAAACAG AGATGATTTG
TTACTTTTCT TATCACTTTC TATTTCAATA GTCGGTTTTT CCATACAAAG CTTTTTCAGC
TTTCCGGGAC ATCTTCTTCC AAATGCCCTT GCGGCAATTG TTTTTGTTGG TATAGCTATA
GGACCGTATT TTACAAAAAA ACCTTTAAAA GAAATAAAGA ATACAAAAGC AATTTTATTA
ATGTTATTCA TTTTAACAGT AACATATGCA TCAACTTATT TAAGATGGAA TCACTTTATT
TCAGAAGTCT ATTTCAAAGA AGGAAATGCA GCTTATTTAA CCTTTGCAAA GATAATGGAA
GAATATCCAA AAGCGGCAGA TTATATATCA CAACTTGAAG AAAAACTTAA AGATTTGAAT
AAACAACAAA GTGAATTTTA TTATCTTAAC AAAGATGTAT GGAAAAGGCA AAAGATTGAA
GAATACAAAA GCAAGAATTT GCCATACAAT GAGTTTGAAA TAGAAAATCA AAGGATTGCA
CAAATAAACA AAATAAAAAA TCAGCTTTTG TCACAAATTG AACAGATAAA AAAGCAAAGA
TCGCAACTTC CATCATTGGC AAAAGATTAC TATATAAAAG CCAAAAAGAA CTTGCTAAGG
AGTGTTACTA TTAACCATAC ATATGGAAAA TCATACTTTT ATCTTGCAAC ATTAGCGGTG
CAAGATTTTA GGATTAATAT TCTAAAAAAC AACATAAAAG AACATTATGA AAAAATATTT
AACCAGGATT TTGATGAATT TCAAAAAATA ATTCATAATA AAACTAAATG GTTAAGTGTG
CTTGTACCAT ACATAAAAGA TCGCAGTGAA ATTTTAGACA AGTTTGATTT TGCAACAGCA
CAAGCTGTTA TAGATTCTAT TGGTATATAC GAAACTTCAC TTCTTTGCTT TAACGAGAGA
AATACCTACA AAGCAATAGC CATGAGATTT CATTCGCTAC ATGTTTTGTT AAAGGAATTA
TTAAATTACA TAGATGAAGA ACAATATAAG GAAAAAATCA AAAAGTTAGT TGTAATAGCG
TTTGATAAAT ATGTTGAGTA TGCAAAGAAA ACATTAACCA ACATGCCAGG TGGTTGGAAT
AGATTTTCCG ATTGGAAAAA TCCAGATATT TCAAAAGCAA CACGTGGTGA GGATATTTAT
AGATTTTTTG CCAGTATGAC GTTCAAACTA CAACCTCCAA TACTAAAACC CGTTTACGAG
TTTACAGAAT GGCTTGCAAA AATGGAAATA AAAGCGGCTA AATACATGAA CTTGAAAAAT
GTCTGGGGAG TTCCAAATGG AGTGATAGAT TTCTTGCATG CCACTTCATT TGAGTATTAT
AAAACTGGAG CCATACAGGA AGCAATATAT ATTTTAGAAA AACTTCACCA CATGTACAAA
GAGTCTTTCT TAATTTCAAG TGAGAGGATT TTAAAGTATA AAGAAGCACT TGATAATCAA
ATTGGAGCTT TAAAAGAAAA ATATTCAAAG AATATTGAAA ATGTTTTAAG TGAAATTCCA
AGTAGTGGAC GAAAAGTAAT AGTTAGGAAT TTTGAAGAAG CAGTTGATAA GGCAAATGAG
GAGTTTAAAA GATACAACTA TATTGCAGTT GAAGCAGATT ACATGAAAAA ACTCATTTCA
CAAAAACCTC AAGACTGGTA CAATGTATCA AAGAATAGTA TTTGGAGCAT GATAATGGTA
AAACATTTAA ACAATTTCCT TTCTAACTTA CAAAAAATGG GTGTACACAC TCAGATAATA
ATCAATATTA AGAATGAAAT ACAAGGATTA ATTAATATAC CAAGTTATGC AAGTATTTAT
GAATCTTATG CAAGATTCAT AGCACATTAC AAATTAATAG AAAATGATTT AAAATTTAAC
GCAGAGAAGT TAATTAACAC ATACTCAGAA ATGACAGATA ATATGTGGGA AAACGTTATT
AAGGATTGGG GAAACGTTCT TTTAGATGAA GGAACACCTT TAACCACAAA AGAGGATATA
TTGAATTTTC TTAAAAAAAT TTCTGGGAGG TGA
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| Protein sequence | MYFKDIFLNI TIVLVALFAS PKLTYEFSVP KYAILTFAFS VLFTYLAAKV IKEKKISIYI
SPAHIIWFFF AISSIISSFN TLRDNPFYFR QSFDIGLYVL FNVLVAFYIS SEYNEKKRIN
ILLFTFMLTG LFISIDALLN FYIGYDIFLG KVGQPLSRGS IKASVGNVIF VANYIDMLLP
IALYFLLAYD LGVKKFWQVS LIKLSSLVSF ILGLMAVIVS QTRSEYLAII VMSVMYVIFY
FVWRKKSSPI PQIKKLTNLL LIVLLIVSVF IVLIYNTENP LTGQGKVNMT NRFSAMASVS
SRDERFLSWF TSLELWEDHK IFGTGIGTYQ LLSLTKMGEY LEKHPELYYG WNNFKRAHND
YFQVLGETGI VGLSLIILLL AFLVYYFFTI PKKIENRDDL LLFLSLSISI VGFSIQSFFS
FPGHLLPNAL AAIVFVGIAI GPYFTKKPLK EIKNTKAILL MLFILTVTYA STYLRWNHFI
SEVYFKEGNA AYLTFAKIME EYPKAADYIS QLEEKLKDLN KQQSEFYYLN KDVWKRQKIE
EYKSKNLPYN EFEIENQRIA QINKIKNQLL SQIEQIKKQR SQLPSLAKDY YIKAKKNLLR
SVTINHTYGK SYFYLATLAV QDFRINILKN NIKEHYEKIF NQDFDEFQKI IHNKTKWLSV
LVPYIKDRSE ILDKFDFATA QAVIDSIGIY ETSLLCFNER NTYKAIAMRF HSLHVLLKEL
LNYIDEEQYK EKIKKLVVIA FDKYVEYAKK TLTNMPGGWN RFSDWKNPDI SKATRGEDIY
RFFASMTFKL QPPILKPVYE FTEWLAKMEI KAAKYMNLKN VWGVPNGVID FLHATSFEYY
KTGAIQEAIY ILEKLHHMYK ESFLISSERI LKYKEALDNQ IGALKEKYSK NIENVLSEIP
SSGRKVIVRN FEEAVDKANE EFKRYNYIAV EADYMKKLIS QKPQDWYNVS KNSIWSMIMV
KHLNNFLSNL QKMGVHTQII INIKNEIQGL INIPSYASIY ESYARFIAHY KLIENDLKFN
AEKLINTYSE MTDNMWENVI KDWGNVLLDE GTPLTTKEDI LNFLKKISGR
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