Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0438 |
Symbol | |
ID | 5297485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 460420 |
End bp | 461031 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768699 |
Product | endonuclease III |
Protein accession | YP_001305690 |
Protein GI | 150020336 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0343367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCTTG AAGAGGTGGC AAAAAGAATT ATAAAAAACT TTCCAAGAAA CCATAAAGAA AAAGATCCGT TTAAAGTTCT AATAACAACG GTTTTAAGCC AAAGAAGCAA AGATGAAAAT ACTGAAATCG CTGCAAATAG GTTATTCGAA AAATATCCCA CACCTCAAAC ACTTCTGAAA GCAAAAGAAG AAGATTTATA TGAACTAATT AAACCTGCGG GATTGTACAG ACAAAAGGCA AAAAGAATAA TAGAAATTTC CAAGATTATT GTAAATAAAT TTTCTGGAAA AGTTCCAGAT ACTCTAGAAG AACTTTTAAC CTTACCTGGT GTTGGACGAA AGACCGCAAA TATTGTATTG TATGTTTCAT TCTCAAAACC TGCTTTAGCC GTTGATACTC ATGTTCATAG GATATCTAAT AGATTGGGGT GGTGTAAAAC AAAAAATCCA AACGAAACGG AATTTGCACT TATGAAACTT CTTCCCAAAG ACCTTTGGGG CCCCATTAAT GGTTCTATGG TTAAATTTGG GAAAAATGTT TGTCTTCCAA GAAATCCAAA GTGCGATATT TGCCCAATCT ATGATTACTG TAAATGGGAG GGTAAGAAAT GA
|
Protein sequence | MHLEEVAKRI IKNFPRNHKE KDPFKVLITT VLSQRSKDEN TEIAANRLFE KYPTPQTLLK AKEEDLYELI KPAGLYRQKA KRIIEISKII VNKFSGKVPD TLEELLTLPG VGRKTANIVL YVSFSKPALA VDTHVHRISN RLGWCKTKNP NETEFALMKL LPKDLWGPIN GSMVKFGKNV CLPRNPKCDI CPIYDYCKWE GKK
|
| |