| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0429 |
|---|
| Symbol | |
|---|
| ID | 5296484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 454834 |
|---|
| End bp | 455112 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640768690 |
|---|
| Product | histone family protein DNA-binding protein |
|---|
| Protein accession | YP_001305681 |
|---|
| Protein GI | 150020327 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00929572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA AGGAACTTGT AAATATGGTG GCAGAAAAGA TGCCAGAGTT AAAGAAAAAA
GATATCAAAG CTGTTATTGA TGCTGTTTTT GAAGCTATTT CAGATGCTTT AGCAAACGGC
GAAAGAGTTC AACTTATTGG TTTTGGAACA TTTGAAGTAA GAAAAGCAGA GGAGAGAACA
GGTGTAAATC CAAGAACAAG AGAAAAAATC AAAATTCCTG CAAGAAAAGT TCCAAAATTC
AAACCTGGTA AAGAGCTCAA AGAAAAGGTT AATAAATAA
|
|---|
| Protein sequence | MSKKELVNMV AEKMPELKKK DIKAVIDAVF EAISDALANG ERVQLIGFGT FEVRKAEERT
GVNPRTREKI KIPARKVPKF KPGKELKEKV NK
|
|---|
| |