Gene Tmel_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0391 
Symbol 
ID5297623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp406192 
End bp407652 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content33% 
IMG OID640768654 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001305645 
Protein GI150020291 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00019845 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAAA ATTTTTCAAG CTTTTTTTAT ATTTTAGTAC TTATTGTAAT TATGATAGTA 
TTGTATGGGT GTTCTCAGCC TTCAGTGTTA TTGAATAATC CACCTTTGGC TCCTTCTATT
CCGTTTCCTT TAGATGGAGC AACAAATGTA AATATTACTC CTACACTTTC GTGGGAATGT
TCAGATCCAG ATGGCGATTC TTTATCTTAC GATATTTACT TTGGTACTGA TCCTAACAAA
CTTCCTGTGA TAAAAGATGA CCATCCTTCA ACAAGTTTAG TTCTTGAAAC AATATCAGGA
TATAAGGAAT TACAAAACGA AACAACATAT TATTGGATGG TAGTTGCAAA AGATAGCAAA
GGAGGAGTAA CGCCAAGCCC CATTTGGAGT TTTACTACTA GTAAACCAGC AAGATTAAAA
TGGAAGTTTG AAACGTATAA TACTATAACT CCTGGACCAG CAATAGCTTC TGACGGGACA
ATTTACATTG GATCTAACGA TAACAATCTT TATGCGATTA ATCCTGATGG TAGCTTAAAG
TGGAAATATA ATTTAGGATC GCCTATATAT TCTTCACCAT CCATTTCTTT TGATGGAACA
ATTTATGTGG TAAGTTGGTA TAAAATCTAT GCAATAAACC CAGATGGTAC TTTAAAATGG
GAAAAAGATT ATGATATTGG TGAACCAGTA AGCCCAGCAA TTGGAGATGA TGGAACAATT
TATGCAGGAG GTTCTTATGA TTTTAAAGCA ATAAATCCAG ATGGAAGTAT TAAATGGGTA
TTTGATGATA ATGTAAGTTT CAGAGGTTCA AGTCCAGCTA TAGGCCCAGA TGGGACAATT
TATGTTGGTT CATCTGATAC AAATTATTTT TATGCGATAA ATCCAGATGG TACTTTAAAA
TGGAAATTTG AAGCAAATTA TGTTATAAAG TCGTCCCCTG CAATAGGTGA AGATGGAACA
ATTTATGTTG GTTCAAATGA TGATAATCTT TATGCTATAA ACCCAGATGG TACTTTAAAA
TGGAAATTTG AAACAGGTGA TGATATTACA ACAAGTCCAG TAATTGGTGA AGATGGGACT
ATTTATGTTG GAAGTTGGGA TGATAATCTG TATGCATTAA ATCCAGATGG CACGCTAAAA
TGGAAATTTA ATGTGAGTTC TTTGATTTAT AGTAGCCCTG TTATTGGTTC TGATGGGATA
ATTTATGTGA GTACATATTA CTATTTATAT GCAGTGAATA AAGATGGCAC ATTGCTGTGG
AAATTTAGTA ATTTCAAAGG TGTTTCAAGA TCGCTTGTTG AATCACATTT ATCTTTATCA
ACTGACGGTA CTTTGTATGC TTCATGTTGG GATGATAATT TATACGCTAT TGAAACTGAT
AGTCCAGGGC TAGCAAATTC ACCTTGGCCA AAATTTCAAA AGAATAATAG AAACACTGGT
AATTATAATG ATGGGCAATA A
 
Protein sequence
MRKNFSSFFY ILVLIVIMIV LYGCSQPSVL LNNPPLAPSI PFPLDGATNV NITPTLSWEC 
SDPDGDSLSY DIYFGTDPNK LPVIKDDHPS TSLVLETISG YKELQNETTY YWMVVAKDSK
GGVTPSPIWS FTTSKPARLK WKFETYNTIT PGPAIASDGT IYIGSNDNNL YAINPDGSLK
WKYNLGSPIY SSPSISFDGT IYVVSWYKIY AINPDGTLKW EKDYDIGEPV SPAIGDDGTI
YAGGSYDFKA INPDGSIKWV FDDNVSFRGS SPAIGPDGTI YVGSSDTNYF YAINPDGTLK
WKFEANYVIK SSPAIGEDGT IYVGSNDDNL YAINPDGTLK WKFETGDDIT TSPVIGEDGT
IYVGSWDDNL YALNPDGTLK WKFNVSSLIY SSPVIGSDGI IYVSTYYYLY AVNKDGTLLW
KFSNFKGVSR SLVESHLSLS TDGTLYASCW DDNLYAIETD SPGLANSPWP KFQKNNRNTG
NYNDGQ