Gene Tmel_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0346 
Symbol 
ID5298207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp357995 
End bp359677 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content36% 
IMG OID640768607 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001305601 
Protein GI150020247 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00236335 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAC GTATTTTGTT TAAGTTGGTA ACACCAATAA TTATTTTGGC ATCTTTGATT 
ATTGTAATAT TTATAACTAC CTACGTAATA ACAACTTCTC AAAAGTTTGA TGCGTTGATT
GTTAATCTTG CAGGAAGACA ACGTATGTTA ACACAGAAGA TGTCCAAGGA AGCGTTAATA
GTTTCGCACG GTGAAGTTAG TTACAAAGAA AAACTTACAA AGACTCTAAA ACTTTTTGAG
ATTACTTTGT ACGCATTAAG AGATGGTGGA AAAACGTACA CAGATCTTAC GATGAAAACA
CCGGTAAAAA TATCGCCGGC GGGAACCGAA AAAATAAAAA AACAATTGAA CGTTGTTGAA
AAACTTTTCC TACCTTTTAA AGATGTTATT CAGCAGAGAA TTCTTAATAG TAACGGTAAA
GATCCAGAAG CGATCAAGTA TATAATAGAT AATAACGAAA AACTTCTTTC AGAAATGAAC
GCCGCGGTGT TACTTTTCCA GAACTTTGCG GAACGAAAAG TCAAATGGAT GAAACATATA
CAAGGATGGT TGGCAATAAC TGGATTAGGT ATTGTTGTGG GTTTTATTAT TTTGTACTGG
AATGTCATCT ACAAACCTTT GAAACAACTT CTCCAAGTAT CACAAGAACT TGCAAGGGGA
GAGGCAGATC TTAGCAAGAG AATACCTGTT ATTACGAAAG ATGAGTTAGG AAAGATAGCA
GATAGCTTTA ATAGGTTTAT GGAAGTTATT AAAAATGTTG CGGTGTCTAT TATGAAAAAC
ACAGATGAAG TAGCTTCTTC TACAAGTGCT CTAAAAAACT TCCTTAATAT AGTTGGGGAT
AAATCAGAAA ATATACGTGA AGTTACAGAT AAATTTACAG AAGATCTTCA ACAGGTTAAT
GAAATAGTTA ATCAAATGGA TGCAAATGTT CAGGAAGTTG CAAAATCCGC TGTTTCAGTA
GCAGAAGCAG CAACGGAGTT GTCGGAAAAT ATGAATGAGA TACTTGAAGA AGCAGATAGT
GGAATGAATA TAATAAAAGA AGTAAACGAA AGTATCGATG TGGTAAATTC TGAAACAAGT
GAGATGGCGA AAAAATCCGA GCTACTTGAA AAATCGGTCA ATGCAATAGG TGAGATATTG
AACGTTATAA GTGGTGTCGC AGAGCAGACG AACTTGCTAG CGTTGAATGC TGCAATTGAA
GCTGCAAGAG CAGGGGAAGC AGGAAAAGGA TTTGCCGTTG TTGCTGACGA AATCAGAAAA
CTTGCAGAGG AAACTAAAAA ATCCGCGGAT GAAATTGCTG TAAAGTTGGG AGATATAAGT
CACAGGTCCA AAGAGACGGC CAATTCGAGC CGAGAAATGG TGGCCTCTAT AAACAGAGTA
CTTGAGAAAA TGGAGGATAT GAGTAAAAAA TTTATTACTA TACGTGAAAA TGTTGAAAAT
GCGGCAAGGA AAGCAGAAGA TCTTGCAGCA GTTTCGCAAG AACAGAGTGC ATCTGCAGAG
GAGATGGCAA GTAGTATTAA GGAAATATCG GGACTTGTCG AGGATACATC GAACCACATG
GTCGAAACAA ACAAAGCTAT CAACGAACAA AGCGAACAAG TTATTTCTGC AAAGAACAAA
ATAGATTATA TCTCAGACAT AGTTGCTAAA CTTAGAGAAA GTGTGAGAGG ATTCAAGGTG
TAA
 
Protein sequence
MRQRILFKLV TPIIILASLI IVIFITTYVI TTSQKFDALI VNLAGRQRML TQKMSKEALI 
VSHGEVSYKE KLTKTLKLFE ITLYALRDGG KTYTDLTMKT PVKISPAGTE KIKKQLNVVE
KLFLPFKDVI QQRILNSNGK DPEAIKYIID NNEKLLSEMN AAVLLFQNFA ERKVKWMKHI
QGWLAITGLG IVVGFIILYW NVIYKPLKQL LQVSQELARG EADLSKRIPV ITKDELGKIA
DSFNRFMEVI KNVAVSIMKN TDEVASSTSA LKNFLNIVGD KSENIREVTD KFTEDLQQVN
EIVNQMDANV QEVAKSAVSV AEAATELSEN MNEILEEADS GMNIIKEVNE SIDVVNSETS
EMAKKSELLE KSVNAIGEIL NVISGVAEQT NLLALNAAIE AARAGEAGKG FAVVADEIRK
LAEETKKSAD EIAVKLGDIS HRSKETANSS REMVASINRV LEKMEDMSKK FITIRENVEN
AARKAEDLAA VSQEQSASAE EMASSIKEIS GLVEDTSNHM VETNKAINEQ SEQVISAKNK
IDYISDIVAK LRESVRGFKV