| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0339 |
|---|
| Symbol | |
|---|
| ID | 5297981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 346240 |
|---|
| End bp | 347844 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640768596 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001305594 |
|---|
| Protein GI | 150020240 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1543] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAG GTAATGTGGT AATGGTTTTA CACGCACATT TGCCATACGT TCACCATCCA
GATTATGATT TTTTCTTGGA AGAAAATTGG CTTTTCGAAG CAATCACGGA AACATATGTT
CCACTTATTA GAATGTTTAA AAGGCTTGAA AATGAAAACA CAAAGTTTAA TCTTACTATG
TCCATTACCC CTCCACTAAT GGAAATGCTT GCAAATAAGG ATTTGCAAGA AAAATACATA
AAAAGAATGA CTAAATTAAT AGAGCTTGCC AAAAAAGAAG TAGAAAGAAC CAAAAATGAA
CATCCAAAAA AACACAAAAT GGCAAAATTC TACCTAGAAG ATTTTAAAGA AATTCTTTAT
ATATTCAAAG ACGTATACAA AGGCAATATT TTAAATGCTT TTAAAGAATT TTTAGAAAAG
GGTAAATTAG ATATTATCAC TTGTAACGCA ACTCACGGTT TTCTTCCTTT TATGGAACAA
TACCCTCAAG CAATCAGAGC ACAGTTAGAA CAAGCAATAA AAACATATGA AAGACATCTT
GGAAGAAAAC CACGAGGAAT CTGGCTTGCA GAATCTGCAT ATTTCTCGGG TCTTGATAAA
TATCTAAAAG AATATGGATT AGAATACTTT TTTGTGGATT CACATGGATT ATGGTATGCC
GATGAAAGAC CAAAATATGG AGTTTACCGT CCCGTTATTA CTCCAAACAA CGTGTTTGTA
TTTGCAAGAG ATCCAGAAAG TAGCGAACAA GTTTGGAGTG CCCAAATAGG TTATCCAGGT
GATGGGAGAT ACAGAGAATT TTACCGGGAT ATAGGTTTTG ATAGGGAGTT TGAATATATA
AAACCATATA TTGATCCTAG CGGAGTAAGG ACAAATACTG GCATAAAATA TCACAAAATA
ACAAGTAAAA ATGTAAATCT CAATGAAAAA GATTTCTACG ACATAGATGA TGCCAAAAGC
ACGGCAAAAG AACATGCAAT TGATTTTTTG AAAAAGAAAG AACAACAAGC AACAAAATTG
TTAAACTTAT TCAAAGGTTT AGAACCCATT ATTGTCGCAC CTTTTGATGC TGAGCTTTTT
GGACATTGGT GGTTTGAAGG TCCCATTTTT TTAGAAGAAT TTATGAGAGC TGCATCAAAA
AGCAAAAAAA TTAGAACTTT AAAAGCGTAT GATGTAGTAG ATATGATTGA AAAAATACAA
ATAGTTACAC CTGCAACATC AACATGGGGA GCAAATGGTT ACAATGAAGT ATGGTTAAAC
GGTACAAATG ATTGGATTTA CCCTCATCTA CATGAAGCTA TTGAAAAGAT GACTGAAGTT
GCAAATATGT ACCCTAATCC AGAAAAAAAT CCTAAAGAAA TAAATGAAGC ATTAAACCAA
ATGGCCAGAG AATTAATGCT TGCTCAATCA AGTGACTGGG CATTTATAAT GACTACTCGT
ACCAGCGTTG ATTATGCTGT TAACAGAACC AAAACACATT TGAAACGTTT TCTAGATTTG
TACAACATGG TCATTAGTGG TAAAATAGAT ATGAGAAGAG TTTCACATTA CGTATGGCTT
GATGACATAT TTCCAGATAT CGACTATACC ATGTACAAGG TATAA
|
|---|
| Protein sequence | MPKGNVVMVL HAHLPYVHHP DYDFFLEENW LFEAITETYV PLIRMFKRLE NENTKFNLTM
SITPPLMEML ANKDLQEKYI KRMTKLIELA KKEVERTKNE HPKKHKMAKF YLEDFKEILY
IFKDVYKGNI LNAFKEFLEK GKLDIITCNA THGFLPFMEQ YPQAIRAQLE QAIKTYERHL
GRKPRGIWLA ESAYFSGLDK YLKEYGLEYF FVDSHGLWYA DERPKYGVYR PVITPNNVFV
FARDPESSEQ VWSAQIGYPG DGRYREFYRD IGFDREFEYI KPYIDPSGVR TNTGIKYHKI
TSKNVNLNEK DFYDIDDAKS TAKEHAIDFL KKKEQQATKL LNLFKGLEPI IVAPFDAELF
GHWWFEGPIF LEEFMRAASK SKKIRTLKAY DVVDMIEKIQ IVTPATSTWG ANGYNEVWLN
GTNDWIYPHL HEAIEKMTEV ANMYPNPEKN PKEINEALNQ MARELMLAQS SDWAFIMTTR
TSVDYAVNRT KTHLKRFLDL YNMVISGKID MRRVSHYVWL DDIFPDIDYT MYKV
|
|---|
| |