Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0288 |
Symbol | |
ID | 5296978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 295306 |
End bp | 296127 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640768545 |
Product | DegV family protein |
Protein accession | YP_001305545 |
Protein GI | 150020191 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000196641 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGCTT TTATCGTTGA TTCTTCATTT GATAAACCTA ATGTTGAAAC AAAATACCCA ATCTTTTTAG CGCCGTTGAG GGTTTACATA GATGGTGTTG AGTATATTGA TAAGAAGAAT TTGTCCGTAG ATGATTTCTA TAGTATGTTG GACAGTGCGG AAGATTTTTC CACATCATTA CCTAACCCAA AAGAGACAGA AGAGTTAGTA AAAAAGCTAA TTGATGAATA TGAGCATGTA TATATGCTTG CATTATCGAG TAAGTTGAGT GGAACATACA ACATGTTTAG GGCAATTAGT GCACCGTATA AGGATAAAGT TACGGTTTTG GATTTGAAGA CTGCTAGTGT AGAATTATAT GCTATATTTA GAGGTATAGT TCATTATTTA GAAGAAGGAA AAGAAATAAC ACAGGAGTTA GTTGACGAAT TAAGGAAAAA GACAAAGTTA TTTTTTGGAG TTATGTCGTT GAAATATTTA GAAAAAGGTG GAAGAATAGG AAAAGCAAAA GCTTTGTTGG GAAGGATTTT AAAGATTAAG CCTATTTTAA CAGTGAATAG TGAAGGTGAA GTAGAAGTGG TTGCAAAGGA ACGAAAATTT ACAAATGTCG TAGAAAAATT GATAGAAATT GGTGAGGAGT TTATAGAGTC TTCAAATTTA AAAAATCCAT ATATCATTGC TGGATATGGT AGTGAAAAAT ACAGAAAATA TTTGGATAAG GTAATTGAAC ATTTTAACAT AAAGGATGTT GCGCAGATTA GTGCAGCAGT AGGTGTTCAT ACTGGACCAG AAGTATTTGG AATTGTTATA GGTCAATTTT GA
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Protein sequence | MVAFIVDSSF DKPNVETKYP IFLAPLRVYI DGVEYIDKKN LSVDDFYSML DSAEDFSTSL PNPKETEELV KKLIDEYEHV YMLALSSKLS GTYNMFRAIS APYKDKVTVL DLKTASVELY AIFRGIVHYL EEGKEITQEL VDELRKKTKL FFGVMSLKYL EKGGRIGKAK ALLGRILKIK PILTVNSEGE VEVVAKERKF TNVVEKLIEI GEEFIESSNL KNPYIIAGYG SEKYRKYLDK VIEHFNIKDV AQISAAVGVH TGPEVFGIVI GQF
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