| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0285 |
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| Symbol | |
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| ID | 5296526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 291576 |
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| End bp | 294179 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768542 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001305542 |
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| Protein GI | 150020188 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00119398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAGT TTTCTTTGGT TTACAATGCA ATTAAAGAAT TATTTGAGAT TGGTTATCCA
AATGAATATT TGGAGAAAAT AGTTAGGATT TTAGAGGATA AATTGCAAAT AAGTAATTTG
AGTCTTTCTA TTTATGAGGA GAGAAAAAAT GTTTATCGAG TAATTGCTGG AAAAGATGTT
GGTAACAAGA TTCCAGCAGA TGGTAGGGAA AATATATTCC CGCTATGTTT TAATGAGAAA
AAAATTGGAG CGATATTTTT TTCAGGAGAG GTTAAAGATA AAAGATTTTT ATATGAATTT
TCAAAACTTT TTTGCCTTAC ATATGACCTT TTTTTAATAG AAAAGAGAAG GGAAAAACTG
GAAAATATTT TGAAGTTAAC TGATGTATTT GAAAAAAGTA AGGAGCTGTA TGAGTTAGAA
AGGAACTTTG TAAAAGAAAT TTCCTTGTAT TTACCTAGTG ATTTAGTTAT GTTTGTTGAA
AAAATTGGAG AAGATTATCG TATAAAATAT TCTGAACCTC AAGATTTTAT TGGAAAAAGG
ATTCCTGGAT ACTCTGATTT TGCGCTTTTT GTATTTAAAC AAAAACCACA AATATTGATA
AAACCCAATA TAAATTTTTT GGGAACAGAT TTGAAGGTGA AATCGTTATT AACAACGCCT
GTTGATAGTG AAAAATGGCT TGTTTTTATA AATAAAAAAC ATGGAAAAGG ATATATTCCA
GACAAAAGTT ATGAGGTTTT TGACCTAGAT CTAGTGATTT CAGCGGTTAA AAGATTTAAT
TTAGGAGTAT CAAGGCTTAC GTTTTACAAA AATCTAAAAT CTGAGATTGA GAAATTGAAT
AATTTAAAGA AAGAGCACGA ACAATTAATT GAAAATCAAA AAGAGCAACT TAGAAAAATG
AGTATAGTGC ATTATTTAAA TCAGGCAATG AGAAGCAGCA ACGATCCCAG TAATGTTCTG
AAGATATTTA TGATTGGATT AACTTCAGGA AGAGCTTTGG GGTTTAACAG AGCACTTCTT
TTGCTAAAAG ATAATGAGAA AAATGTGTTA ATTGGAAAGG CTTGGATTGG TCCAGCAAAT
GAGGAAGAAG TTGATACAAT TTGGAAGAAA GCCAATCAGA GAGCCATGAA GTATGCAGAC
ATTGTTCAAT ACTTGAGGGA AGAGTCTTTG GCACTTGGTT TAAGTAATGA ATTAACTAAA
AAAATAAAAG ATAAGATGTT TCCATATAGA TCTAGCAAGT TTTTGGAAAG AGCAGTTGTT
AGAAGAAAGA TTGTTCATGT GAATAAGAAG GTGTTGGAAG ATGAATTAGA TTATATAATT
TCCGTTTTGG ATGTAGACGA ATTTGTTATA GTACCGCTTA TTGGAAAGAA CGATACAATT
GGTGTTGTAA TTTTGGATAA TAAATACTCT GGGCATAGGA TTTCAAATGT TGATATAGAG
ATTTTAAGGT TAATTTCAGA CAGTGCAGGC CTTGCAATAG AAAATGCGTT AAATTACAAG
GAATTGAAAG ATAAAACTTT AAACCTTGAA AAGCAAAAAA GTTTAGTGGA GTTTTTAAAG
GAATTTTCAG ATCTTATTTT GCAAAATTTA TCTGCGGCAG TTGTTGTTAT TAGAAAAGAT
GGGATTATTA CTGAATGGAA TTCACGTGCA GAGTATTATT TTGGCAGGAA TAAGGAACAA
ATGCTTGAAA AAAGATTGGC AAATTTGGGA ACGGAGTTTG AGGATATTGA GAGTATGGCT
TTTGAAGTGT TGAAAATGAA GGAAGAAATA AAGCTTTCAA ATTATCTTAT TCCGGTTTTA
GGACAAGAAA AGTATTTTGA TGTTTCTATT TCGCCGCTTT GGGATGCAGA AAGATTATTG
ATAAAAGGTG TTATTGTTAC ATTTGAAGAT GTTACTGAGA GAGTTATTTT AGAGAAAGAG
AGAAAAAAAC AAGAAAAATT AGCGGCATTA GGCGAAATGG CGGCGCGGGT TGTTCACGAA
CTTAGAAATC CTATTTCAGT CTTAGGAGGA TTTGTTAAAA GACTTGAAAA ATATATAGAT
GATGATAGTA AGAGGAGAAA ATATATAAAA ATTATTTCAG ATGAAATTGT TAGGTTGGAA
GGGATAGTTA GTGAAATTTT AGAGTTTAGT AGGGACAAAA AAGTTATGGA GTTTGCTGAA
TTTAATCTAA ATGAATTAAT AACGGAAGTA TATATTTTAT TTGAAGATAG AATAAAAGAA
AAAAATATAT TGTTTGAATT CAAAACAGAT AACGAAAACA TAGAAGTTTA TGCAGATAAG
CAGAGAATAA AACAAGTTTT GATAAATCTT TTGCAAAACG CTATTGATGA AACACCATAC
GGTGGTAAAA TATTAATTGA GGTAGGAAAA TATTTGAGTA AAGTTAGGGT AAAAGTTTGG
AATCAAGGTA CACCCATACC TAAGGATGTG CTGGAGAAAT TGTTTATTCC ATTTTTTACA
ACAAAGGTTC ATGGAACGGG ATTGGGACTT CCTATCTGTA AAAAGATAGT TGAGGATGAG
CATAATGGGA AGATTTGGGT AGAACCTGAT AAAGATGGAA ATGCATTTAT ATTTGAATTA
CCATTAGAAA GCGAGGATGA GTAG
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| Protein sequence | MIEFSLVYNA IKELFEIGYP NEYLEKIVRI LEDKLQISNL SLSIYEERKN VYRVIAGKDV
GNKIPADGRE NIFPLCFNEK KIGAIFFSGE VKDKRFLYEF SKLFCLTYDL FLIEKRREKL
ENILKLTDVF EKSKELYELE RNFVKEISLY LPSDLVMFVE KIGEDYRIKY SEPQDFIGKR
IPGYSDFALF VFKQKPQILI KPNINFLGTD LKVKSLLTTP VDSEKWLVFI NKKHGKGYIP
DKSYEVFDLD LVISAVKRFN LGVSRLTFYK NLKSEIEKLN NLKKEHEQLI ENQKEQLRKM
SIVHYLNQAM RSSNDPSNVL KIFMIGLTSG RALGFNRALL LLKDNEKNVL IGKAWIGPAN
EEEVDTIWKK ANQRAMKYAD IVQYLREESL ALGLSNELTK KIKDKMFPYR SSKFLERAVV
RRKIVHVNKK VLEDELDYII SVLDVDEFVI VPLIGKNDTI GVVILDNKYS GHRISNVDIE
ILRLISDSAG LAIENALNYK ELKDKTLNLE KQKSLVEFLK EFSDLILQNL SAAVVVIRKD
GIITEWNSRA EYYFGRNKEQ MLEKRLANLG TEFEDIESMA FEVLKMKEEI KLSNYLIPVL
GQEKYFDVSI SPLWDAERLL IKGVIVTFED VTERVILEKE RKKQEKLAAL GEMAARVVHE
LRNPISVLGG FVKRLEKYID DDSKRRKYIK IISDEIVRLE GIVSEILEFS RDKKVMEFAE
FNLNELITEV YILFEDRIKE KNILFEFKTD NENIEVYADK QRIKQVLINL LQNAIDETPY
GGKILIEVGK YLSKVRVKVW NQGTPIPKDV LEKLFIPFFT TKVHGTGLGL PICKKIVEDE
HNGKIWVEPD KDGNAFIFEL PLESEDE
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