Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0244 |
Symbol | smpB |
ID | 5296871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 248462 |
End bp | 248905 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640768500 |
Product | SsrA-binding protein |
Protein accession | YP_001305503 |
Protein GI | 150020149 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.750258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA TTGCAACAAA CAAAAAGGCA TTCTCAGATT ATATAATTTT AGAAACTTAT GAAGCAGGAA TAGAGTTAAG AGGAACTGAG GTAAAGTCCT TAAGAGAGTC AGGTGCAAAT TTTAAAGATA GTTTTTGTAG GATAAAAAAC GGAGAAGTGT TTTTGTTAAA TCTAAATATT CCGCAATACA GGAATGGGAG TTTAAACAAT CATGACCCGG AAAGGCCCAG AAGGCTTTTG CTTCATAAGA AAGAGATACA TAGACTTCTT GGGAAAGTTA AAGAACAAGG ATTAACAATA ATTCCAACAA AGATATATTT TAATAATAGA GGGTTGGTAA AGGTTGAAAT TGCGGTGGCG AAAGGAAAGA AAAAATACGA TAAGAGAGAA GATATAAAGA AGAGAGAAAT TAATAGGAGA ATAAGGGAAT ATTTAAAGGG GTGA
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Protein sequence | MKIIATNKKA FSDYIILETY EAGIELRGTE VKSLRESGAN FKDSFCRIKN GEVFLLNLNI PQYRNGSLNN HDPERPRRLL LHKKEIHRLL GKVKEQGLTI IPTKIYFNNR GLVKVEIAVA KGKKKYDKRE DIKKREINRR IREYLKG
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